Gene Sbal223_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1445 
SymbolfliN 
ID7087498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1688635 
End bp1689015 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content43% 
IMG OID643460348 
Productflagellar motor switch protein 
Protein accessionYP_002357375 
Protein GI217972624 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0098879 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG ACGATACGGA TGATTGGGCT GCAGCAATGG CAGAACAAGC CTTAGAAGAA 
GCTAACGCGA TTGAACTCGA TGAATTAGTT GATGATTCAA GACCTATCAC TAAGGCAGAA
GCGGCAAAAT TAGATACTAT TTTAGATATC CCCGTCACTA TCTCTATGGA AGTGGGCCGT
AGCTACATTA GTATTCGTAA CCTGTTGCAG TTAAACCAAG GTTCTGTGGT TGAGCTAGAC
AGAGTTGCGG GTGAGCCCTT AGATGTGATG GTTAACGGTA CGCTGATTGC ACATGGTGAG
GTTGTGGTAG TAAACGATAA ATTCGGTATT CGTTTAACCG ATGTGATCAG TCAAACCGAG
CGAATTAAAA AGCTTAAATA A
 
Protein sequence
MSTDDTDDWA AAMAEQALEE ANAIELDELV DDSRPITKAE AAKLDTILDI PVTISMEVGR 
SYISIRNLLQ LNQGSVVELD RVAGEPLDVM VNGTLIAHGE VVVVNDKFGI RLTDVISQTE
RIKKLK