Gene Sbal223_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1425 
Symbol 
ID7087478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1666335 
End bp1668260 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content48% 
IMG OID643460328 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_002357355 
Protein GI217972604 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTG ATCTGCTGAA TATTGCGCGA ACTGGAGTGC TTGCCTCCCA GTCGCAACTG 
GGTGTCACCA GTAATAACAT TGCTAACGCA AATACCGCGG GTTACCACAG ACAAGTGGCA
ACTCAGTCGA CTCTAGAATC ACAGCGTTTA GGCAATAGCT TTTATGGCAC TGGAACTTAC
GTTAATGACG TTAAGCGTAT CTACAATGAC TATGCCGCAA GAGAGTTGCG CATTGGCCAA
ACAACGCTCA GTGCCGCCGA AGCCAGCTAC GGTAAATTGA GTGAACTCGA TCAGCTATTT
TCACAAATAG GCAAAGTTGT CCCACAAAGC TTAAATAACC TGTTTTCAGG GCTAAATAGC
ATAGCTGACT TACCAGCAGA TTTGGGCATC CGCAGCTCGA CCTTAACGAA TGCGCAGCAA
GTCGCCAGTA GCCTGAATCA GATGCAGTCT TATTTGAATG GCCAGCTCGA TCAGACGAAT
GACCAGATAA CCGGCATGAC CAAGCGTATC AATGAGATAG GTACTGAGCT GGCAAAGTTA
AATCTAGAGT TGATGAAGTC GCCGAATCAA GATGCGCAGC TGCTCGATAA GCAAGATGCA
CTCGTTCAAG AGTTGAGTCA GTACGCCCAA GTCAATGTCA TCCCGCAAGA AAATGGCGCC
AAGAGTATCA TGCTCGGTGG CTCTGTAATG CTGGTTTCCG GTGAGATTGC CATGAGTATG
GGGACTCAAG CGGGCAACCC ATTTCCCAAA GAGTTACAGC TTAACTCAAG TATTAGCTCG
CAAAGCGTCA CTGTTGACCC AAGTAAACTG GGTGGTCAGC TAGGAGCCAT GTTTGATTAT
CGTGACCAGA CGTTAATTCC CGCAGGTCAT GAGCTGGACC AATTAGCTTT GGGCGTGGCT
GATAACTTCA ACAAAATGCA AGCGCAAGGC ATTGACCTCA ATGGGCAAGT CGGCGCTAAT
ATCTTCAAAG ATATCAATGA TCCTATGATG TCCTTGGGCC GTGCCGCAGG TTTTTCTGGT
AACACTGGCA ATGCAACGTT AGGCGTCACC GTCGATGACA CCAGTTTATT AACTGGCGGT
GCCTACGAGC TGTCATTTAC CTCGCCTGCC ACTTATGAAT TGAGAGATAC AGAAACGGGG
ACGATAACAC CGCTGACGTT AACGGGCTCG ACATTATCGG GTGGTTCTGG ATTTTCAATT
GACATAAAAG CAGGCGCTAT GGCGTCGGGG GATCGCTTTG CTATTCGCCC GACAGCGGGG
GCTTCAAATG GCATTGAAGT TGTTATGAAA GACCCTAAAG GTATTGCCGC CGCATCCCCA
AAGATTACTG CAGATGCCGC TAACTCGGGC AATACCCAAG TTAAGTTGAC TCAAATTGGT
AATCGCAATG CCGCAAATTT CCCTGTGACG GGCAGTGAAT TGACGATCAA ACTCGACACC
ACAGTCGTGC CACCCACCTA TGAAGCATTC GATGCCGCAG GAACATCACT TGGGGCTGCT
ACAACTTATA CCCCACCGAG TATCAGCGCC TTTGGTTTTA CCTTTGAAGT AGATAGTACA
GCTGCAGCGG GTAATGACAG ATTTACCTTC GATTTATCCT TCGCCGAGGG TGATAACTCC
AATGCTGTCG CTATGGCTAA ATTGAGCGAA AGTAAAGTGA TGAATAATGG CAAATCGACC
TTAGCGGATG TGTTCGAGAA TACTAAGCTC GACATTGGCA GTAAAACGAA AGCGGCCGAA
GTGCGTACAG GTTCGGCAGA GGCCGTGTAT CAGCAAGCTT ATGCGCGAGT AGAGAGTGAG
TCGGGCGTGA ACTTAGATGA AGAAGCCGCA AATTTAATGC GTTTTCAGCA AGCCTATCAA
GCCTCTGCGC GGATCATGAC GACCGCACAG CAGATTTTTG ACACCTTATT ATCCTCAGTG
CGTTAG
 
Protein sequence
MAVDLLNIAR TGVLASQSQL GVTSNNIANA NTAGYHRQVA TQSTLESQRL GNSFYGTGTY 
VNDVKRIYND YAARELRIGQ TTLSAAEASY GKLSELDQLF SQIGKVVPQS LNNLFSGLNS
IADLPADLGI RSSTLTNAQQ VASSLNQMQS YLNGQLDQTN DQITGMTKRI NEIGTELAKL
NLELMKSPNQ DAQLLDKQDA LVQELSQYAQ VNVIPQENGA KSIMLGGSVM LVSGEIAMSM
GTQAGNPFPK ELQLNSSISS QSVTVDPSKL GGQLGAMFDY RDQTLIPAGH ELDQLALGVA
DNFNKMQAQG IDLNGQVGAN IFKDINDPMM SLGRAAGFSG NTGNATLGVT VDDTSLLTGG
AYELSFTSPA TYELRDTETG TITPLTLTGS TLSGGSGFSI DIKAGAMASG DRFAIRPTAG
ASNGIEVVMK DPKGIAAASP KITADAANSG NTQVKLTQIG NRNAANFPVT GSELTIKLDT
TVVPPTYEAF DAAGTSLGAA TTYTPPSISA FGFTFEVDST AAAGNDRFTF DLSFAEGDNS
NAVAMAKLSE SKVMNNGKST LADVFENTKL DIGSKTKAAE VRTGSAEAVY QQAYARVESE
SGVNLDEEAA NLMRFQQAYQ ASARIMTTAQ QIFDTLLSSV R