| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1339 |
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| Symbol | |
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| ID | 7088764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1571198 |
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| End bp | 1572235 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643460243 |
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| Product | twitching motility protein |
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| Protein accession | YP_002357270 |
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| Protein GI | 217972519 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0176269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000000675214 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATCA CTGAGTTATT GGCATTTAGT GTAAAACACA AAGCCTCGGA TCTACACCTT
TCTGCAGGGA TATCTCCCAT GATCCGTGTC GACGGTGAAG TGAGAAAAAT TAACCTGCCC
GCGCTCGATC ACCAAGGCGT ACACAGCCTA GTGTACGACA TAATGAATGA TAAGCAGCGC
AAGGACTACG AAGAACATTT AGAAATCGAT TTCTCGTTCG AAGTCCCTAA TCTTGCACGC
TTTCGTGTTA ACGCATTCAA TCAATCCCGT GGTGCTGCGG CCGTATTTCG TACCATTCCT
AGCGACATCT TGTCACTTGA GCAATTAGGT GCGCCGGAGA TTTTTAAAAA AATCGCCAGT
TTCCCTCGGG GATTAGTCCT AGTGACTGGA CCAACGGGTT CGGGTAAGAG TACCACACTT
GCCGCTATGG TGGATTACGT TAACGAAAAT CGACACGATC ACATCTTAAC CATTGAAGAT
CCTATCGAAT TCGTACACCA AAATAAGCAA TGTTTGATTA ACCAGCGTGA AGTTCACCGC
CATACCCACA GCTTTAATGC GGCGCTTAGA AGCGCGCTGC GTGAAGATCC GGACGTGATT
TTAGTTGGTG AGATGCGTGA CCTTGAAACC ATTCGTTTGG CGATGACCGC CGCAGAAACA
GGCCACTTAG TGTTTGGTAC CTTGCATACC ACCTCCGCCG CGAAAACCAT TGACCGTGTG
GTCGACGTAT TCCCCGCCGG TGAAAAAGAC ATGGTGCGCA CTATGTTGTC GGAATCGCTG
CAAGCGGTTA TTTCGCAAAC CCTGATTAAA AAGGTAGGCG GAGGCCGTGT CGCCGCCCAT
GAAATCATGA TGGGCACTCC CGCTATTCGT AACCTTATTC GTGAAGACAA AGTGGCGCAG
ATGTATTCGG CGATTCAAAC CGGTATGGCC CACGGAATGC AGACCTTAGA GCAATGTTTA
CAGAATTTAG TCAATCGCGG TCTTATCACC CGTGAAGATG CAATGGCGAA GAGTTCGAAT
AAACAAGCGA CATTTTAA
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| Protein sequence | MEITELLAFS VKHKASDLHL SAGISPMIRV DGEVRKINLP ALDHQGVHSL VYDIMNDKQR
KDYEEHLEID FSFEVPNLAR FRVNAFNQSR GAAAVFRTIP SDILSLEQLG APEIFKKIAS
FPRGLVLVTG PTGSGKSTTL AAMVDYVNEN RHDHILTIED PIEFVHQNKQ CLINQREVHR
HTHSFNAALR SALREDPDVI LVGEMRDLET IRLAMTAAET GHLVFGTLHT TSAAKTIDRV
VDVFPAGEKD MVRTMLSESL QAVISQTLIK KVGGGRVAAH EIMMGTPAIR NLIREDKVAQ
MYSAIQTGMA HGMQTLEQCL QNLVNRGLIT REDAMAKSSN KQATF
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