Gene Sbal223_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1311 
Symbol 
ID7089874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1547306 
End bp1548106 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID643460215 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002357242 
Protein GI217972491 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.978372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTG TTAAGCCATT GAAAATTAAT ACCGTGCTTA TTACAGGTGC AAGCTCAGGC 
ATTGGGCTGC AACTGGCGCA GGATTATTTA GCCTTAGGTT GGCACGTCAT TGCCTGTGGC
CGCTCCCAAG AAAGATTAGA TGCGTTAGCC TTGAATGAAC TCGTAGGTGC CACGCTGTTA
ATTTTTGATA TATCCCAGCG CGACCAAGTT CAACAAGCTG GCCACGATTT AGCCGAGCTG
TTGGCGAAAA CCGATTGTCA GCTCGATTTG GTGGTTTTGA ACGCAGGCAG TTGTGAGTAT
ATAGACGATG CTAAGGCCTT CGATGATGTG TTATTCGAGC GCGTCGTCCA TACCAATTTA
ATTGCGATGG GATATTGTCT CAGCGCATTT TTACCTTTAA TGCCAAGGGG TTCCCGTATT
GGCTTAATGA GTTCCAGCGC TATTTATTTA CCTTTCCCTC GCGCTGAAGC CTACGGCGCC
TCTAAAGCTG GCGTGCAGTA TCTCGCTTCG AGTCTCTCGC TTGATCTTGC TAAGAATGAC
ATAGGTGTGA GCTTGATTTG CCCTGGTTTT GTGGCGACGC CCCTAACCGC AAAAAATGAT
TTTTCTATGC CAATGCAAGT GAGTGTACAA ACCGCTTCTA AGGCGATACG TAATGGGCTG
AAAGGTGGTA AGCGCGAGAT CGATTTTCCG CGACGCTTTA CTTATCTATT GAAATTGATG
TCGTTTTTAC CTGCCTTTGT GTGGCAAAAA ATGATTGCAA ACGATACTCA AACCAAGCCG
CTTAAGGACA AGAGTTTATG A
 
Protein sequence
MDVVKPLKIN TVLITGASSG IGLQLAQDYL ALGWHVIACG RSQERLDALA LNELVGATLL 
IFDISQRDQV QQAGHDLAEL LAKTDCQLDL VVLNAGSCEY IDDAKAFDDV LFERVVHTNL
IAMGYCLSAF LPLMPRGSRI GLMSSSAIYL PFPRAEAYGA SKAGVQYLAS SLSLDLAKND
IGVSLICPGF VATPLTAKND FSMPMQVSVQ TASKAIRNGL KGGKREIDFP RRFTYLLKLM
SFLPAFVWQK MIANDTQTKP LKDKSL