Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1311 |
Symbol | |
ID | 7089874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1547306 |
End bp | 1548106 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643460215 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002357242 |
Protein GI | 217972491 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.978372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTG TTAAGCCATT GAAAATTAAT ACCGTGCTTA TTACAGGTGC AAGCTCAGGC ATTGGGCTGC AACTGGCGCA GGATTATTTA GCCTTAGGTT GGCACGTCAT TGCCTGTGGC CGCTCCCAAG AAAGATTAGA TGCGTTAGCC TTGAATGAAC TCGTAGGTGC CACGCTGTTA ATTTTTGATA TATCCCAGCG CGACCAAGTT CAACAAGCTG GCCACGATTT AGCCGAGCTG TTGGCGAAAA CCGATTGTCA GCTCGATTTG GTGGTTTTGA ACGCAGGCAG TTGTGAGTAT ATAGACGATG CTAAGGCCTT CGATGATGTG TTATTCGAGC GCGTCGTCCA TACCAATTTA ATTGCGATGG GATATTGTCT CAGCGCATTT TTACCTTTAA TGCCAAGGGG TTCCCGTATT GGCTTAATGA GTTCCAGCGC TATTTATTTA CCTTTCCCTC GCGCTGAAGC CTACGGCGCC TCTAAAGCTG GCGTGCAGTA TCTCGCTTCG AGTCTCTCGC TTGATCTTGC TAAGAATGAC ATAGGTGTGA GCTTGATTTG CCCTGGTTTT GTGGCGACGC CCCTAACCGC AAAAAATGAT TTTTCTATGC CAATGCAAGT GAGTGTACAA ACCGCTTCTA AGGCGATACG TAATGGGCTG AAAGGTGGTA AGCGCGAGAT CGATTTTCCG CGACGCTTTA CTTATCTATT GAAATTGATG TCGTTTTTAC CTGCCTTTGT GTGGCAAAAA ATGATTGCAA ACGATACTCA AACCAAGCCG CTTAAGGACA AGAGTTTATG A
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Protein sequence | MDVVKPLKIN TVLITGASSG IGLQLAQDYL ALGWHVIACG RSQERLDALA LNELVGATLL IFDISQRDQV QQAGHDLAEL LAKTDCQLDL VVLNAGSCEY IDDAKAFDDV LFERVVHTNL IAMGYCLSAF LPLMPRGSRI GLMSSSAIYL PFPRAEAYGA SKAGVQYLAS SLSLDLAKND IGVSLICPGF VATPLTAKND FSMPMQVSVQ TASKAIRNGL KGGKREIDFP RRFTYLLKLM SFLPAFVWQK MIANDTQTKP LKDKSL
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