Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1277 |
Symbol | |
ID | 7089840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1508181 |
End bp | 1509083 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643460182 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_002357209 |
Protein GI | 217972458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0441893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGC AGCAACTGTG GGTTTTGGAT GGTGGCATGG GGCGTGAGTT GGCAAGACGG GGCGCACCCT TTCGCCAGCC TGAGTGGTCG GCGTTGGCCC TTATAGAAGC GCCGCAAACC GTGACTGAGG TACATCAAGC TTACGTAGCC AGCGGTGCCA AAGTCATCAC CACCAACAGT TATGCACTCG TGCCATTTCA TATCGGCGAT GAGCGTTTTG CCGCCGAGGG TGAAGTGCTG GCTGCATTGG CGGGCAAACT GGCACGGGAT GTCGCGGATG AACACGCAAA TGCGGTTCGC GTCGCGGGCT CATTGCCACC CTTGTTCGGC TCTTACCGTG CCGATTTATT TGAGGCCGCG AGGGTGAGTG AACTGGCTCT CCCACTCATT CGAGCGCTGT CGCCCAGTGT CGATCTCTGG TTAGCCGAAA CCATGAGTTT GATTGCTGAG CCTTTAGCCA TCAAGGCCTT GCTGCCAGAA GATGGCAAAC CATTTTGGGT TTCTTTTACC TTAGAGGACG AGACGTTAGG TAGCGAACCG ACACTTCGCT CCGGTGAGCG GGTGGCAGAT GCTATCGACG CGTTAGTAGC AGTCGGTGTG GATGCGATTC TGTTCAACTG TTGTCAGCCT GAGGTGATTG AGGCGGCATT ACAGGTGGCC AGCGACAGAT TGAGTGCTCT GGGGCGTGCC GATATTCGAC TCGGTGCCTA TGCCAATGCA TTTCCTCCTC AGCCGAAAGA GGCAACGGCT AACGATGGTC TGGATGAGAT CCGTGCCGAT CTTGGGCCGC TTGATTATCT CGGTTGGGCT GAGCGTTGGC GCGCGGTAGG GGCTTCGCTT ATCGGTGGTT GCTGCGGCAT TGGTCCCGAA CACATTCAGG CACTTGCTAC TCGTTTGCGC TAA
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Protein sequence | MDKQQLWVLD GGMGRELARR GAPFRQPEWS ALALIEAPQT VTEVHQAYVA SGAKVITTNS YALVPFHIGD ERFAAEGEVL AALAGKLARD VADEHANAVR VAGSLPPLFG SYRADLFEAA RVSELALPLI RALSPSVDLW LAETMSLIAE PLAIKALLPE DGKPFWVSFT LEDETLGSEP TLRSGERVAD AIDALVAVGV DAILFNCCQP EVIEAALQVA SDRLSALGRA DIRLGAYANA FPPQPKEATA NDGLDEIRAD LGPLDYLGWA ERWRAVGASL IGGCCGIGPE HIQALATRLR
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