Gene Sbal223_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1277 
Symbol 
ID7089840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1508181 
End bp1509083 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content56% 
IMG OID643460182 
Producthomocysteine S-methyltransferase 
Protein accessionYP_002357209 
Protein GI217972458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0441893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC AGCAACTGTG GGTTTTGGAT GGTGGCATGG GGCGTGAGTT GGCAAGACGG 
GGCGCACCCT TTCGCCAGCC TGAGTGGTCG GCGTTGGCCC TTATAGAAGC GCCGCAAACC
GTGACTGAGG TACATCAAGC TTACGTAGCC AGCGGTGCCA AAGTCATCAC CACCAACAGT
TATGCACTCG TGCCATTTCA TATCGGCGAT GAGCGTTTTG CCGCCGAGGG TGAAGTGCTG
GCTGCATTGG CGGGCAAACT GGCACGGGAT GTCGCGGATG AACACGCAAA TGCGGTTCGC
GTCGCGGGCT CATTGCCACC CTTGTTCGGC TCTTACCGTG CCGATTTATT TGAGGCCGCG
AGGGTGAGTG AACTGGCTCT CCCACTCATT CGAGCGCTGT CGCCCAGTGT CGATCTCTGG
TTAGCCGAAA CCATGAGTTT GATTGCTGAG CCTTTAGCCA TCAAGGCCTT GCTGCCAGAA
GATGGCAAAC CATTTTGGGT TTCTTTTACC TTAGAGGACG AGACGTTAGG TAGCGAACCG
ACACTTCGCT CCGGTGAGCG GGTGGCAGAT GCTATCGACG CGTTAGTAGC AGTCGGTGTG
GATGCGATTC TGTTCAACTG TTGTCAGCCT GAGGTGATTG AGGCGGCATT ACAGGTGGCC
AGCGACAGAT TGAGTGCTCT GGGGCGTGCC GATATTCGAC TCGGTGCCTA TGCCAATGCA
TTTCCTCCTC AGCCGAAAGA GGCAACGGCT AACGATGGTC TGGATGAGAT CCGTGCCGAT
CTTGGGCCGC TTGATTATCT CGGTTGGGCT GAGCGTTGGC GCGCGGTAGG GGCTTCGCTT
ATCGGTGGTT GCTGCGGCAT TGGTCCCGAA CACATTCAGG CACTTGCTAC TCGTTTGCGC
TAA
 
Protein sequence
MDKQQLWVLD GGMGRELARR GAPFRQPEWS ALALIEAPQT VTEVHQAYVA SGAKVITTNS 
YALVPFHIGD ERFAAEGEVL AALAGKLARD VADEHANAVR VAGSLPPLFG SYRADLFEAA
RVSELALPLI RALSPSVDLW LAETMSLIAE PLAIKALLPE DGKPFWVSFT LEDETLGSEP
TLRSGERVAD AIDALVAVGV DAILFNCCQP EVIEAALQVA SDRLSALGRA DIRLGAYANA
FPPQPKEATA NDGLDEIRAD LGPLDYLGWA ERWRAVGASL IGGCCGIGPE HIQALATRLR