| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1250 |
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| Symbol | alaS |
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| ID | 7086563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1476368 |
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| End bp | 1478992 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643460156 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002357183 |
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| Protein GI | 217972432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.586835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000263081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATCAAA CTACAGCAGA GCTTAGAAGC GCTTTCCTCG AATTTTTCCG CAGCAATGGT
CATCAAGTTG TGGACAGTAG TTCATTAGTG CCAGGCAACG ATCCCACACT TTTATTTACC
AATGCAGGCA TGAACCAGTT CAAGGACGTG TTTCTTGGCA TGGACAAACG CAATTATACG
CGTGCGACCA CTGCTCAACG TTGTGTACGC GCCGGTGGTA AGCATAACGA TTTAGATAAC
GTCGGTTATA CAGCACGTCA TCACACCTTT TTCGAAATGC TGGGTAACTT CAGTTTTGGT
GATTATTTCA AAGAAGAAGC GATTCGCTTT GGCTGGACTT TCTTAACTGA AACGTTAAAG
CTGCCGAAAG AACGTCTGTG TGTCACTATT TATCAAACAG ATGATGAAGC CTTTGAAATC
TGGAATAAAA AGATTGGTGT TGCTGCTGAG AACATTATCC GTATCGGCGA CAACAAAGGT
GCTGCTTATG CGTCAGATAA CTTCTGGCAA ATGGGTGATA CCGGTCCTTG CGGCCCATGT
TCTGAGATTT TCTATGATCA TGGCGATCAC ATTTGGGGCG GCCGTCCTGG CAGTCCTGAA
GAAGATGGCG ACCGCTTCAT CGAAATCTGG AACATAGTGT TCATGCAGTA CAACCGTCAA
GCATCGGGTG AAATGTTGCC TTTGCCTAAG CCATCGGTTG ATACCGGCAT GGGGATTGAG
CGTATTGCCG CGATTATGCA AGGCGTACAT TCTAACTACG AAATCGATAT CTTCCGTACG
CTGATAGCCA AAGCGGCAGA AATCATCGGC GTAAGCGATT TAACCGAGAA GTCACTGCGC
GTCATTGCCG ACCATATCCG TTCATGTGCA TTCCTTATTG CCGATGGTGT TATGCCGTCG
AACGAAGGCC GCGGTTATGT GCTGCGCCGT ATTATCCGCC GCGCAGTTCG CCATGGTAAC
AAGTTAGGCG CGACCGAAGC TTTCTTCTAT AAGCTGGTTC CGTCTTTGAT TGCTGTGATG
GGCGATGCGG CCAAAGGGTT AGCTGAGACT CAAGCGATTG TTGAAAAAGC TCTGAAAGCG
GAAGAAGAGC AATTTGCTCG TACGCTTGAA CGTGGTTTAG GCATTTTAGA TGCGGCCTTA
AACGAGTTAA AAGGTGACAC CTTAGATGGT GAAACCGTAT TTAAGCTGTA TGACACCTAT
GGCTTCCCAA TGGATTTAAC CGCTGACGTA TGTCGCGAGC GCAACATCAT TGTCGATGAA
GCAGGTTTCG AAGTCGCTAT GGCTGAACAA CGTAGCCGCG CACAAGCTGC CGGTAACTTT
GGTGCAGATT ATAACGCGGC ACTGAAAATT GATGCCGAAA CCGCATTCAG TGGTTACACC
GAATTAGCGG GTCAAGCTAA GATCACTGCG ATTTATCAAA ACGGTGAGTC AGTGACGGCG
ATCAAAGCGG GTGACGAAGC GGTTGTTGTA CTCGACGTGA CACCTTTCTA CGCGGAATCT
GGCGGTCAAG TGGGCGATAA AGGCCAACTG GTTGCGAACG GTGTTGAGTT TACGGTTAAT
GACACACAAA AGTATGGTCA AGCAACGGGC CATCAAGGTG TTTTAGCTAC AGGTAGCTTG
AGTGTTGGCC AAGTTGTTGA GGCGAAAGTC GACAAAAAAC TGCGTCACCG TACTCAGTTA
AACCATTCTG TTACGCATTT ACTGCATGCC GCACTGCGTC AAGTGCTCGG TACTCACGTT
TCGCAAAAAG GTTCTTTGGT TGATCCTGAG CGTTTGCGTT TTGACTTCTC CCATTTCGAA
GGTGTAAAAG CCGCTGAATT AAAAGAAGTT GAAGAATTAG TTAACACTCA AATTCGTCGT
AACCATGAGC TGAAAACCGC TGAAATGGGT ATAGATGAAG CCAAAGAGAA AGGCGCAATG
GCGCTCTTTG GTGAGAAATA TGACTCACAA GTGCGTGTTG TGACTATGGG TGATTTCTCT
ATCGAATTGT GTGGTGGTAC CCATGTGGGC CGCACGGGCG ATATTGGCTT ATTCAAAATC
ACTTCTGAAG CGGGTATTGC TGCGGGTGTG CGTCGTATCG AAGCCGTTAC TGGCGCTGCG
GCTATGGCTT ATGTGGCGCA GCAACAAGCT GAACTGGAAG AAGCTGCAGC CTTATTGAAA
GGCGATGCCA ACTCAGTGGT GGCTAAGTTA AAAGCCCAGC TCGATAAGAT GAAGCAACTC
GAAAAAGAAA TGGCGCAGTT GAAAGACAAG CTAGCTGCCG CAGCGAGTGC TGATTTAGTG
GGTGATGCTA TTGTGGTTAA TGGCGTTAAC GTGCTGATCA AAAAGTTAGA CGGCGTTGAG
GCAAGCTCGT TACGCGGTCT GCAAGATGAA TTAAAACAAA AATTGAAATC GGCCATTATC
GTTCTTGGCA CTGCGCAGGA AGGGAAAGTT AACCTGATTG CCGGTGTGAG TAACGATCTG
ATCGGCAAAG TCAAAGCGGG TGAGCTAGTC GCTATGGTCG CTGCACAAGT GGGCGGTAAA
GGCGGCGGTC GTCCTGATAT GGCTCAAGCG GGCGGTAGCC AGCCAGAAAA TCTGGATGCG
GCATTGGCTC AAGTATTACC TTGGATTACT GAGCGTCTAG CTTAA
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| Protein sequence | MYQTTAELRS AFLEFFRSNG HQVVDSSSLV PGNDPTLLFT NAGMNQFKDV FLGMDKRNYT
RATTAQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEEAIRF GWTFLTETLK
LPKERLCVTI YQTDDEAFEI WNKKIGVAAE NIIRIGDNKG AAYASDNFWQ MGDTGPCGPC
SEIFYDHGDH IWGGRPGSPE EDGDRFIEIW NIVFMQYNRQ ASGEMLPLPK PSVDTGMGIE
RIAAIMQGVH SNYEIDIFRT LIAKAAEIIG VSDLTEKSLR VIADHIRSCA FLIADGVMPS
NEGRGYVLRR IIRRAVRHGN KLGATEAFFY KLVPSLIAVM GDAAKGLAET QAIVEKALKA
EEEQFARTLE RGLGILDAAL NELKGDTLDG ETVFKLYDTY GFPMDLTADV CRERNIIVDE
AGFEVAMAEQ RSRAQAAGNF GADYNAALKI DAETAFSGYT ELAGQAKITA IYQNGESVTA
IKAGDEAVVV LDVTPFYAES GGQVGDKGQL VANGVEFTVN DTQKYGQATG HQGVLATGSL
SVGQVVEAKV DKKLRHRTQL NHSVTHLLHA ALRQVLGTHV SQKGSLVDPE RLRFDFSHFE
GVKAAELKEV EELVNTQIRR NHELKTAEMG IDEAKEKGAM ALFGEKYDSQ VRVVTMGDFS
IELCGGTHVG RTGDIGLFKI TSEAGIAAGV RRIEAVTGAA AMAYVAQQQA ELEEAAALLK
GDANSVVAKL KAQLDKMKQL EKEMAQLKDK LAAAASADLV GDAIVVNGVN VLIKKLDGVE
ASSLRGLQDE LKQKLKSAII VLGTAQEGKV NLIAGVSNDL IGKVKAGELV AMVAAQVGGK
GGGRPDMAQA GGSQPENLDA ALAQVLPWIT ERLA
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