| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1210 |
|---|
| Symbol | nrdR |
|---|
| ID | 7087982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1428386 |
|---|
| End bp | 1428835 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643460119 |
|---|
| Product | transcriptional regulator NrdR |
|---|
| Protein accession | YP_002357146 |
|---|
| Protein GI | 217972395 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.665936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTCA TCGATTCTCG ATTAGTGGCG
GAAGGCCATC AAGTGCGCCG TCGCCGAGAA TGCACCGAAT GCCATGAAAG ATTTACCACC
TTCGAAGGCG CCGAGTTAGT CATGCCTAGG GTGATTAAAC GTGATGGTTC ACGCCAACCC
TTCGATGAAG AAAAACTCCA AGGTGGCATG TTGCGCGCCG TTGAAAAACG CCCCGTGTCT
ATGGATGAAA TCGAGCAAGC GCTTAGCAAA ATCAAATCCA CCCTACGCGC CACTGGTGAG
CGGGAAGTGC CGTCAGAAAT GGTCGGTAAC TTGATGATGG AGCAATTGAT GAGTCTCGAT
AAAGTCGCCT ACATACGTTT TGCTTCTGTG TACCGCGCCT TTGAAGACGT ATCTGAATTT
GGTGAAGCCA TCGCCAAACT GCAAAAGTAG
|
|---|
| Protein sequence | MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGSRQP
FDEEKLQGGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMVGN LMMEQLMSLD
KVAYIRFASV YRAFEDVSEF GEAIAKLQK
|
|---|
| |