| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1137 |
|---|
| Symbol | |
|---|
| ID | 7087590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1337709 |
|---|
| End bp | 1338473 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643460048 |
|---|
| Product | TatD-related deoxyribonuclease |
|---|
| Protein accession | YP_002357075 |
|---|
| Protein GI | 217972324 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000948863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000000294805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGATTGATA CCCACGCACA TCTAGATTTT GCCGAGTTTG ATCTTGACCG CGATGCTGTG
GTGCAGCGAA TGCGCAGTGT TGGGGTTGAT AATCTGATTA TTCCTGGCGT GTCTCCGCAG
CACTGGCACA AACAGCTCGC AGTTGCTGAA CAATATCAAA CCTATTTTGC CCTTGGTATC
CATCCTTGGT TTTGTCCAGA GGATGTTGAT GCAGGGATCT TAGCATTAAC ATCTAAAGTT
GCCGCGTTGC TCGAATGTCC TCGTTTTGTT GCTATTGGTG AATGTGGCTT AGATAAGCTT
TATTCCTCAA CATGGCCGCA GCAGTTAGCG TTTTTTGAGG CGCAACTGAC GTTAGCTAAA
TCCGTTAATC TGCCAGTGAT TATTCATAGT GTGAAGGCAC ATCCCGAGGT TTTGGCCTGT
TTAAAAAAGT ATCAATTGCC TAGAGGCGGT GTGATACATG CTTTTTCTGG CAGTGTTGAG
ATTGCACAGG AATATATCAA GTTAGGTTTT AAGTTGGGAA TTGGTGGTTT GATTATGAAT
CTTAATGCCA AAAAATTACT CAAAACTGTC ACTGAACTCC CGCTCGAACA CCTCATACTT
GAGACTGATT CTCCGGCTAT GACGCCGATA AATGTTGCAG AAAAACGTAA CCAACCCGCT
AACCTTGTTC TTTTTATAGA CAAAATTGCC GCTTTGCAAA AAAAATCAAG TGTTCTAATA
TCAGAACACT TGATGTCGAA TGCAGCGCAA CTGTTTGACC TTTAG
|
|---|
| Protein sequence | MIDTHAHLDF AEFDLDRDAV VQRMRSVGVD NLIIPGVSPQ HWHKQLAVAE QYQTYFALGI
HPWFCPEDVD AGILALTSKV AALLECPRFV AIGECGLDKL YSSTWPQQLA FFEAQLTLAK
SVNLPVIIHS VKAHPEVLAC LKKYQLPRGG VIHAFSGSVE IAQEYIKLGF KLGIGGLIMN
LNAKKLLKTV TELPLEHLIL ETDSPAMTPI NVAEKRNQPA NLVLFIDKIA ALQKKSSVLI
SEHLMSNAAQ LFDL
|
|---|
| |