Gene Sbal223_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1133 
Symbol 
ID7087586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1332530 
End bp1334629 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content45% 
IMG OID643460044 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_002357071 
Protein GI217972320 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.84141e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.21656e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAATCCTA TTGTAAAGAG TTTTGAGTAT GGTCAACATA CAGTCACCCT GGAAACAGGT 
GTTATAGCGC GTCAAGCAGA TGCAGCCGTT TTAGCGAGTA TGGGTGACAC GACTGTGTTG
GTCACTGTTG TCGGTAAAAA AGAAGCAGAT GCAGGTCGTG ACTTTTTCCC TCTGACTGTT
AACTATCAAG AAAAAACCTA CGCAGCGGGT AAAATTCCTG GTGGTTTCTT TAAGCGTGAA
GGCCGTCCTT CAGAAGATGA GACATTAATC GCTCGTCTGA TCGACCGTCC AATTCGCCCT
CTTTTCCCTA ATGGTTTCAA AAACGAAGTT CAAGTTATCA TTACTGTAGT ATCTGTCGAT
CCACAAATCG AGCCAGATAT CATCTCTATG ATTGGTACTT CTGCGGCACT GGCTATTTCT
GGTATTCCAT TCAGCGGTCC TTTAGGGGCT GCACGTGTGG GTTACATTGA TGGCGAATAC
GTGTTGAACC CAAGTGTTGC GCAACTTGCA ACCAGCCAAC TGAACTTAGT GGTTGCTGGT
ACTGCTGGTG CAGTATTAAT GGTGGAATCA GAAGCCCAAG CATTGCCAGA AGAAGTGATG
TTAGGTTCTG TTGTTTACGG TCACGATCAA CAACAAGTGG TTATCAAAGC GATTGCTGAA
TTTAAAGCAG AAGCCGGTAA ACCAACTTGG GATTGGACTG CACCAACGCA AGATGCCGAT
TTAGTTGCCC AAATCAAAGA GCTTGCTGAA GCTGGTTTAG GCGATGCGTA TAAAATCCAA
GTTAAACAAG ATCGTTATGC TCAAGTTTCT GTTGTTAAAG CAGCAACAAA AGAAGCCTTG
TTAGCCAGCA ATCCAAGCAT TGATTTACGT GAAGTAGACA ACTTGCTGGG TAGCTTAGAG
AAGAAAGTGG TTCGTGGTCG CATCATCCGT GGTGAGCCAC GTATCGATGG TCGTGAACCA
GACATGATCC GTGCATTAAG CGTGTTAGCG GGCGTATTGC CACGTACTCA CGGTAGCGCA
TTGTTCACTC GCGGTGAAAC TCAAGCGTTA GTGACTTGTA CTTTAGGCAC TGAACGTGAT
GCACAGAAGA TTGACAGCAT CATGGGCGAG CGCACTAACC GTTTCATGCT GCACTATAAC
TTCCCTCCAT ACTCTGTTGG TGAAACAGGC ATGGTGGGTT CACCTAAGCG CCGCGAAATC
GGTCATGGTA AGTTAGCATG GCGCGGTATC AATGCTGTTA TGCCTTCAGC TGCTGAATTC
CCATACAGCG TGCGCGTTGT ATCTGAAATC ACTGAATCTA ACGGTTCAAG CTCTATGGCG
TCAGTATGTG GTACTTCATT AGCTCTGATG GATGCTGGTG TGCCTATCAA AACTTCTGTA
GCGGGTATAG CTATGGGTCT AGTGAAAGAA GGCGATGATT TCGTTGTTCT TTCTGACATC
TTAGGTGATG AAGATCATTT AGGTGACATG GACTTTAAAG TTGCGGGTAC GCGTGATGGT
ATTACTGCAC TGCAGATGGA TATCAAGATC GAAGGTATCA CTAAAGAAAT CATGGATATC
GCACTGCAAC AAGCCTATGG CGCACGTGTA CATATCCTGA ACGTGATGGA TCAAGCGATT
GGTTCACACC GTGACGATAT TTCTGATCAC GCTCCACGTA TCACTGTTAT CAAGATCAAC
CCAGAAAAAA TCCGTGACGT TATCGGTAAA GGCGGCGCAG TTATCCGTGC TCTTACTGAA
GAAACCGGCA CTACGATTGA ACTGGAAGAT GACGGTACTG TGAAGATCGC TTCTTCAAAC
GGCGAAGCAA CCAAAGAAGC TATCCGTCGT ATCGAAGAAA TCACTTCAGA AGTTGAAGTG
GGTCGTATCT ACAACGGTAA AGTTATCCGT ATCGTTGATT TCGGTGCGTT CGTGAACATT
CTGCCAGGCA AAGACGGTTT AGTACACATT TCACAAATCA GTGATGAGCG TGTTGCTAAC
GTGTCTGATC ACCTTGAATT GAACCAAGAA GTTGCTGTTA AAGTAATGGA AGTGGATCGT
CAAGGCCGCG TACGTCTGTC AATTAAAGAA GCACAAACTA AAGAAACTGC TGCTGAATAA
 
Protein sequence
MNPIVKSFEY GQHTVTLETG VIARQADAAV LASMGDTTVL VTVVGKKEAD AGRDFFPLTV 
NYQEKTYAAG KIPGGFFKRE GRPSEDETLI ARLIDRPIRP LFPNGFKNEV QVIITVVSVD
PQIEPDIISM IGTSAALAIS GIPFSGPLGA ARVGYIDGEY VLNPSVAQLA TSQLNLVVAG
TAGAVLMVES EAQALPEEVM LGSVVYGHDQ QQVVIKAIAE FKAEAGKPTW DWTAPTQDAD
LVAQIKELAE AGLGDAYKIQ VKQDRYAQVS VVKAATKEAL LASNPSIDLR EVDNLLGSLE
KKVVRGRIIR GEPRIDGREP DMIRALSVLA GVLPRTHGSA LFTRGETQAL VTCTLGTERD
AQKIDSIMGE RTNRFMLHYN FPPYSVGETG MVGSPKRREI GHGKLAWRGI NAVMPSAAEF
PYSVRVVSEI TESNGSSSMA SVCGTSLALM DAGVPIKTSV AGIAMGLVKE GDDFVVLSDI
LGDEDHLGDM DFKVAGTRDG ITALQMDIKI EGITKEIMDI ALQQAYGARV HILNVMDQAI
GSHRDDISDH APRITVIKIN PEKIRDVIGK GGAVIRALTE ETGTTIELED DGTVKIASSN
GEATKEAIRR IEEITSEVEV GRIYNGKVIR IVDFGAFVNI LPGKDGLVHI SQISDERVAN
VSDHLELNQE VAVKVMEVDR QGRVRLSIKE AQTKETAAE