Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1130 |
Symbol | truB |
ID | 7087583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1328726 |
End bp | 1329691 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460041 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002357068 |
Protein GI | 217972317 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0346458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000000626709 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTCGTC GTCCAAAAGG TCGTTTTATT GATGGGATAG TGCTGCTGGA TAAATCCACT GGCATGAGTT CTAACTTTGC ATTGCAAAGG GTAAAGCGCT TTTTTAATGC GAACAAAGCA GGGCATACGG GCGCACTTGA TCCGTTAGCG ACAGGTATGC TACCTGTGTG CTTAGGCGAA GGGACTAAGT TTTCCCAGCA TCTGTTAGAT GCCGATAAAC GCTATTTAGT TACCGCAAAG CTGGGCGAGC GAACGGATAC CAGTGATTCC GATGGCGAAG TGGTGCAAAC CCGCGCCATT GATTTTACTG AGGCGCAGTT ATTAACCGCG CTTGATTTCT TCCGTGGTGA GACTCAGCAA GTGCCTTCTA TGTATTCCGC GCTTAAATAT CAGGGCCAGC CCCTGTATAA ATATGCCCGT GAAGGCATTG AAGTGCCGCG CGAATCTCGC CCTATTACGG TATTTGAGCT TAATTTTATC GGTCTTGAAG GCGATGAGCT GACCTTAGAC ATTCATTGTT CTAAGGGCAC TTATATTCGC ACTATCATAG ACGATCTCGG TGAAATGCTC GGTTGCGGCG CCCATGTCAT CATGTTGCGT CGCACTCAAG TTGCACAATA TCCCTATGCA AGAATGGTTA CCTTAGAACA ACTTGAAGCG CTTGTTGCTC AAGCACATGA ACAACAGATT GATCCAAGTG TACTTCTTGA TCCGCTGTTA TTACCTATGG ATACGGCTGT GGCTGATTTC CCAGAGGTGA ATGTGCCTGA TGCAATCGCC CCTTACTTAA TGCAAGGTCA GGCTGTTCGG GTCCCCGTTA ATGCAGACTT GAAAACCGAT GAACTGGTGC GTATCACTTT AGGTGACATT CGCCGATTTG TGGGGATTGG CACGATGAAC GAAGACGGCC TACTCGCGCC AAAACGACTC ATAGTGATCC ATGACGAGCC TGCAGAAACT GATTAG
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Protein sequence | MARRPKGRFI DGIVLLDKST GMSSNFALQR VKRFFNANKA GHTGALDPLA TGMLPVCLGE GTKFSQHLLD ADKRYLVTAK LGERTDTSDS DGEVVQTRAI DFTEAQLLTA LDFFRGETQQ VPSMYSALKY QGQPLYKYAR EGIEVPRESR PITVFELNFI GLEGDELTLD IHCSKGTYIR TIIDDLGEML GCGAHVIMLR RTQVAQYPYA RMVTLEQLEA LVAQAHEQQI DPSVLLDPLL LPMDTAVADF PEVNVPDAIA PYLMQGQAVR VPVNADLKTD ELVRITLGDI RRFVGIGTMN EDGLLAPKRL IVIHDEPAET D
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