Gene Sbal223_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1124 
Symbol 
ID7087577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1322008 
End bp1322790 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content47% 
IMG OID643460035 
Producttriosephosphate isomerase 
Protein accessionYP_002357062 
Protein GI217972311 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.21721e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.28037e-12 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACTCA GACGTCCTAT GGTAGCTGGC AATTGGAAGA TGAACGGCAG TGCGGCATTA 
GCCCAAGAGT TGTTCAAAAA ATTTGCCTCT AAGCTCCAAA ATGATTCAGC TGAAGTGGTT
TTATGCCCGC CTTCTATCTA TCTAGAGAGC GTTAGGCAAC TGCTAGAAGC AAACAAGGAA
GCGTTAGACG GTTCACTTGT TAGGATGGGC GCACAAAACC TAAGTCAACA CGACTTTGGC
GCCTATACCG GAGAAGTTTC AGGTCAGATG CTCAAAGATT CAGGATGTCG ATATGTAATT
ATCGGACATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAATATCGT AGCGGAGAAA
TTCGCCGCTG CACAAAAGCA TGGCTTAACT CCCATTTTAT GTGTGGGTGA GTCAGGTCCA
GCACGTGAAG CAAGACGCAC CTTCGAGGTG ATTGCGGAAG AGTTGGATAT AGTGATCCAG
AAAAACGGCA CTATGGCTTT TGATAACGCC ATTATCGCCT ACGAGCCACT TTGGGCTGTA
GGGACAGGTA AAAGCGCTAC ACCAGAGCAG GCACAAGAAG TTCATGCGTT TATTCGCAAA
CGCCTCTCTG AAGTGTCTCC GTTTATCGGA GAAAATATCA GGATTCTCTA CGGTGGTAGT
GTAACACCGA GTAATGCTGC AGATTTATTT GCCCAACCTG ATGTTGATGG TGGACTGATT
GGCGGTGCTA GCTTAAACTC TAGCGAGTTT TTAAGTCTGT GTACCATAGC GATGAGCGCA
TAA
 
Protein sequence
MALRRPMVAG NWKMNGSAAL AQELFKKFAS KLQNDSAEVV LCPPSIYLES VRQLLEANKE 
ALDGSLVRMG AQNLSQHDFG AYTGEVSGQM LKDSGCRYVI IGHSERRRMY GETSNIVAEK
FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDIVIQ KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI
GGASLNSSEF LSLCTIAMSA