Gene Sbal223_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1089 
Symbol 
ID7087862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1283685 
End bp1284518 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content49% 
IMG OID643460000 
Productrare lipoprotein A 
Protein accessionYP_002357027 
Protein GI217972276 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.93551e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.47193e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTCTAA AAAATAATCT TTTACAGCTT GCCGCCTTGG TTATGTGCTT CGCCCTTGCG 
GCGTGTTCTT CAAGCCCAAA CAACGCCAGC AAGAAAAACA TGGACCCGAA CAAGGGCCGT
TATTCGCTGA AGAATGACAA GCTGCCGCTG AATCCACCGA ATGTGGATAA TGTGCCGAAC
GCGACGCCTA AGTACGAACC CTATAGCCGC CGTGGTAACA AACCCTATAC GGTTTACGGT
GAGTCTTATA CTGTGATGAA CACGGGCCAA GGCTTTAGTG AAACTGGCCG CGCCTCTTGG
TATGGAGAGA AATTCCATGG CTACGAGACT TCTAATGGCG AGCCCTATGA CATGTATTCC
ATGTCGGGTG CCCATAAGAC ACTGCCACTG CCAAGTTACG CTCGGATCAC TAACTTAGAT
AACAATAAGC AAGTGATCAT TCGCATCAAC GACCGTGGAC CATTCCACTC AGATCGTATT
CTCGATGTCT CCTATGCCGC CGCCTATAAA CTCGGTATGC TCGGCAAAGG CACAGCGCGG
ATCAAACTGG ATGTGGTTTA TGTTGGCAGT GTTGCAGCCA CTAATTCTGG CGTAGTCAGC
GCGCAAGATA CGGGCAACCA TTACATTCAG TTAGTGGCCT CCAAAGATAG GGCCAAACTC
AATGCCATGG CGAAAGAGCT TGAACAGAAA TATCAGGTCA AGACCCGTGT ACAAGCGGCA
AACAATATGT TTAGACTACA GCTCGGCCCC ATAGGTCAGC CAGAGTTAGC CGACAAGCTA
CTCAATAACG TCAAGCAAAA TGGTTTTCCT GAGGGCTATA TCGTCCATGA ATAA
 
Protein sequence
MPLKNNLLQL AALVMCFALA ACSSSPNNAS KKNMDPNKGR YSLKNDKLPL NPPNVDNVPN 
ATPKYEPYSR RGNKPYTVYG ESYTVMNTGQ GFSETGRASW YGEKFHGYET SNGEPYDMYS
MSGAHKTLPL PSYARITNLD NNKQVIIRIN DRGPFHSDRI LDVSYAAAYK LGMLGKGTAR
IKLDVVYVGS VAATNSGVVS AQDTGNHYIQ LVASKDRAKL NAMAKELEQK YQVKTRVQAA
NNMFRLQLGP IGQPELADKL LNNVKQNGFP EGYIVHE