| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0995 |
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| Symbol | metH |
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| ID | 7086466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1173421 |
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| End bp | 1177155 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643459907 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002356934 |
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| Protein GI | 217972183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0391552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATAC CCTCTACCAA AGCCGGCCAG ATATTGGCAG ACATTCGTAA ACAGCTTGCT
GCACGCATTC TAATCTTAGA CGGTGCCATG GGCACAATGA TCCAAGACCA CAAGCTCGAA
GAAGAGGATT ATCGCGGCGA ACGCTTTAAA GATTGGCACA CTGACGTCAA AGGCAACAAC
GATTTATTGG TGTTGTCGCA ACCCCAGATC ATCAAACAGA TTCACACCGA CTACTTAAAC
GCCGGTGCCG ACATCATTGA AACCAACACC TTTAATGCTA CTACTATCGC CATGGCCGAC
TACGACATGC AGTCGCTGTC CGCCGAAATT AACTTAGCCG GCGCCCGCCT CGCCCGTGAA
GCCTGTGATG AAGTGTTTGC TGCTACGGGC ATTCCACGCT ACGTCGCCGG TGTGTTAGGC
CCCACTAATC GTACGTGTTC GATTAGCCCA GATGTGAATG ACCCAGGCTA CCGCAACGTC
AGCTTCGATG AGTTAGTGAG CGCTTACCGA GAATCCACTA AGGCGCTGAT TGAAGGCGGC
GCGGATATCA TTATGGTCGA GACCATATTC GATACCTTAA ATGCCAAAGC CGCACTGTTT
GCTATTGAAT CGGTATTTGA TGACTTATTT GGTCAGCATT CTAAAGACAG ATTGCCAATC
ATGATTTCGG GCACCATTAC CGATGCCTCA GGCCGTACCC TTACCGGTCA AACGACCGAA
GCCTTTTATA ATTCCCTGCG CCATATCAAG CCGTTATCTA TCGGTCTTAA CTGTGCGCTC
GGACCAAAAG AGCTGCGCCC GTACGTCGAA GAATTATCCC GTATAGCCGA ATGTTATGTG
TCGGCGCATC CGAACGCGGG CCTGCCGAAC GAGTTTGGCG GCTACGATGA AACCCCAGAG
GACATGGCAA ACGTAATTGA AGATTGGGCG CGCGAAGGCA TGCTCAATAT TATCGGTGGT
TGCTGTGGTA GTACGCCTGA ACATATCCGC GTTATTCGCG AAGCGGTCGA CAGACATAAC
CCGCGCGTGT TGCCCGATAT CCCCGTCGCT TGCCGCTTAG CCGGTTTGGA ACCGCTGACT
ATCGACGCCC AATCCCTGTT CGTTAACGTG GGTGAGCGCA CCAACGTCAC AGGTTCGGCC
AAGTTTTTAA AGCTGATCAA AGACGGTAAG TTTGAGCAAG CGCTCGATGT CGCTCGCGAG
CAGGTCGAGA GCGGCGCGCA GATCATCGAC ATCAACATGG ACGAAGGCAT GCTCGATGGC
GCCGAGATCA TGCACAAGTT TTTAAACTTG ATAGCCTCTG AGCCCGACAT CAGCCGCGTG
CCGATTATGA TCGACTCCTC TAAGTGGGAA GTGATCGAAG CTGGCCTCAA ATGCATTCAA
GGCAAGGGCA TAGTTAACTC GATTTCCCTT AAAGAAGGCG AAGCCAAGTT TATTGAGCAA
GCAACACTGG TGAAACGCTA CGGCGCGGCG GCCATTATCA TGGCGTTCGA CGAACAAGGT
CAGGCCGATA CTAAGGCACG TAAAATCGAA ATCTGTACCC GCGCCTACCG CGTGCTGGTC
GACAAGGTCG GCTTTCCGCC AGAAGACATC ATCTTCGACC CGAACATTTT TGCCATCGCC
ACCGGTATCG ATGAACACGA CAACTATGCC GTCGATTTTA TTGATGCCAT TAAAGCAATT
AAAGCCACCC TGCCCCATGC AATGATTTCG GGCGGCGTGT CGAACGTGTC GTTCTCGTTT
CGCGGTAACA ACCCAGTGCG CGAAGCAATT CACGCGGTAT TCCTGTACCA CGCCATCAAA
GTCGGCATGG ACATGGGGAT TGTCAACGCG GGCCAATTAG CCATTTACGA CGATATCGAT
CCTGAACTTA AAGTGCGGGT CGAAAACGTG GTGCTTAACT TGCCCTGCCC AGTCGAAGGC
TCAAGCAATA CCGAGCAGTT ACTTGAAATC GCGGAGAAAT TCCGCGGTGA TGGCGCACAG
GTCGGTAAGA AAGAAGATTT AGAATGGCGC AGCTGGCCAG TGAGCCAACG CTTATCCCAT
GCGCTCGTCA AAGGCATTAC CGAATTTATC GATGAAGATA CCGAAGCCGC TCGCCAAGAG
GCGAAACGTC CACTGGATGT GATTGAAGGC GCCTTGATGG ATGGCATGAA CGTGGTCGGC
GACTTGTTCG GCTCGGGCAA GATGTTCTTG CCGCAGGTGG TGAAATCGGC GCGAGTAATG
AAAAAAGCCG TGGCTTACTT AAACCCCTAT ATCGAGCTGG AAAAGGTCGA AGGCCAATCT
AACGGCAAGA TCTTGATGGT GACGGTAAAA GGTGACGTGC ACGATATCGG CAAAAATATC
GTCGGCGTGG TGCTCGCCTG TAACGGTTTT GAGGTATTCG ATTTAGGTGT GATGGTGTCG
GTGGAGCGAA TTCTCGACGC CGTGAAAGAA CACAATATCG ATATCATCGG CATGTCGGGC
CTAATCACGC CGAGTCTGGA CGAGATGGTG CATAACGTGA AAACCTTCCA CCGCGAAGGC
TTAACCATTC CGGCGATTAT CGGCGGTGCG ACTTGCTCTA AAATCCACAC AGCGGTGAAA
ATTGCGCCCC ATTATCCCCA TGGTGCTATT TATATCGCCG ATGCGTCCCG CGCCGTGCCT
ATGGTGAGTA AGCTCATCAA CAACGAGACC CGCCAAGCGA CCATAGACGA AGCCTATGCC
GAATACGACG ACATGCGCAC TAAGCGTTTA TCCCAAGCCA AGCGCAAAGA GATAGTGTCA
CTCGAAGCGG CCCGTGAAAA CCGCTGCCAA CACGATTGGG CCAACTACAC CCCGTTCACG
CCAAATGTGC TCGGTCGCCA AGTCTTTGAT AATTATCCGT TAGAAGACTT AGTCGAGCGT
ATCGACTGGA CACCGTTTTT CCGCTCGTGG GAACTGCATG GCCATTACCC CGAAATCCTC
ACCGATAAAG TGGTCGGTGA AGAAGCACAA AAGCTGTTCG CCGATGGTCA GGCCATGCTC
AAGCAAATCA TCGAAGAAAA GTGGCTCACG GCGAAAGCGG TTATTGGCTT ATTCCCTGCC
AATACCGTCA ATTACGACGA CATTGAGCTG TATACCGATG AGTCGCGCAT CACAGTTGAA
ATGACCACAC ATCACCTGCG GATGCAGCTT GAGCGTGTCG GCAACGATAA CTTCTGTCTA
TCTGACTTTG TTGCACCAAA AGACTCTGGC GTCGCCGATT ACATGGGCGG CTTTGCGGTG
ACTACAGGCC ACGGCATAGA CGAACATGTG GCACGTTTTG AAGCCAACCA CGACGACTAC
AACGCCATCA TGCTCAAGTG CTTAGCCGAC CGTTTGGCCG AAGCCTTTGC CGAGCGGATG
CACGAGCGGG TACGTAAAGA GTTTTGGGGT TATGCGGCCG ATGAGCAGTT AAGCAACGAA
GCCTTAATCC GCGAGAAATA CAAAGGTATA CGCCCCGCAC CCGGTTACCC AGCATGCCCA
GATCACACAG AAAAAGGCTT GTTATGGGAC TTGCTCAAGC CCGATGAAAC CATCGACTTG
AACATCACCG AAAGCTACGC CATGTTCCCC ACAGCGGCAG TATCGGGCTG GTATTTCGCC
CACCCGAAAT CCCGCTACTT TGGCGTGAGT AACATAGGCC GCGATCAAGT GGAAGATTAT
GCCAAGCGTA AAGGGATGAC TGTAGCAGAA ACGGAGAAGT GGCTGGCGCC AGTGTTGGAT
TATGACCCTG AATAG
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| Protein sequence | MTIPSTKAGQ ILADIRKQLA ARILILDGAM GTMIQDHKLE EEDYRGERFK DWHTDVKGNN
DLLVLSQPQI IKQIHTDYLN AGADIIETNT FNATTIAMAD YDMQSLSAEI NLAGARLARE
ACDEVFAATG IPRYVAGVLG PTNRTCSISP DVNDPGYRNV SFDELVSAYR ESTKALIEGG
ADIIMVETIF DTLNAKAALF AIESVFDDLF GQHSKDRLPI MISGTITDAS GRTLTGQTTE
AFYNSLRHIK PLSIGLNCAL GPKELRPYVE ELSRIAECYV SAHPNAGLPN EFGGYDETPE
DMANVIEDWA REGMLNIIGG CCGSTPEHIR VIREAVDRHN PRVLPDIPVA CRLAGLEPLT
IDAQSLFVNV GERTNVTGSA KFLKLIKDGK FEQALDVARE QVESGAQIID INMDEGMLDG
AEIMHKFLNL IASEPDISRV PIMIDSSKWE VIEAGLKCIQ GKGIVNSISL KEGEAKFIEQ
ATLVKRYGAA AIIMAFDEQG QADTKARKIE ICTRAYRVLV DKVGFPPEDI IFDPNIFAIA
TGIDEHDNYA VDFIDAIKAI KATLPHAMIS GGVSNVSFSF RGNNPVREAI HAVFLYHAIK
VGMDMGIVNA GQLAIYDDID PELKVRVENV VLNLPCPVEG SSNTEQLLEI AEKFRGDGAQ
VGKKEDLEWR SWPVSQRLSH ALVKGITEFI DEDTEAARQE AKRPLDVIEG ALMDGMNVVG
DLFGSGKMFL PQVVKSARVM KKAVAYLNPY IELEKVEGQS NGKILMVTVK GDVHDIGKNI
VGVVLACNGF EVFDLGVMVS VERILDAVKE HNIDIIGMSG LITPSLDEMV HNVKTFHREG
LTIPAIIGGA TCSKIHTAVK IAPHYPHGAI YIADASRAVP MVSKLINNET RQATIDEAYA
EYDDMRTKRL SQAKRKEIVS LEAARENRCQ HDWANYTPFT PNVLGRQVFD NYPLEDLVER
IDWTPFFRSW ELHGHYPEIL TDKVVGEEAQ KLFADGQAML KQIIEEKWLT AKAVIGLFPA
NTVNYDDIEL YTDESRITVE MTTHHLRMQL ERVGNDNFCL SDFVAPKDSG VADYMGGFAV
TTGHGIDEHV ARFEANHDDY NAIMLKCLAD RLAEAFAERM HERVRKEFWG YAADEQLSNE
ALIREKYKGI RPAPGYPACP DHTEKGLLWD LLKPDETIDL NITESYAMFP TAAVSGWYFA
HPKSRYFGVS NIGRDQVEDY AKRKGMTVAE TEKWLAPVLD YDPE
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