Gene Sbal223_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0941 
Symbol 
ID7087302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1103564 
End bp1104646 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content44% 
IMG OID643459855 
ProductRhomboid family protein 
Protein accessionYP_002356882 
Protein GI217972131 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA AATGTCCTGG TTGTCATAAC CATAAAATGC GTGAATATGA GTTTCACGGT 
GAACAAGTGG ATACTTGCGA GGCCTGTGGA GGATTGTGGT TTGATAACGG TGAACTCAAC
AAAGCGTTGT CGAAGGCAGA CAATGGCGAT GACAAAGTTC GTGTTGAAGA AACACTCGGT
GCACATTTAG GTCAGGCTAA GCGCCAATGT GGCCATTGTG AGGTGTCGCT TGAGCGCTAC
CACTTGATGG ATGGTTACCA AATCGAAGTC GATGTTTGCC ATAGCTGCAG CGGCATATGG
ATAGACAGGG ATGAAAGCGA CAAAGTGGTG AAATCTCCAC TTGTTAAAAA CCTGCTCGCT
GAACTGGACG CAAAAATAAG CACTAAGACT TGGATATTCC AATTCTTATC CCAGATGCCA
GTTGAGTTTA ACCTCAAGCC GAAAAAGCCG CCTGTGGTGA CCTACTTGTT ACTGGCGCTC
AATATTTTGG TTTTTGTTGG CTATGGATTT GATCTGGATA TGACTGATAA CGTGTTTGCT
CGTTTTGCAC TACGGGCTGA CGACGTAATG CACGGTAGCC ATGTTTGGAC TCTATTTAGC
CATATGTTTT TACACGGTGA TTTAATGCAT CTTGCCGGTA ATATGTACTT TTTATATGTA
GTTGGCGATA ACCTCGAAGA TGCGCTTGGC CGCGCCCGCT TTTTTGTGTT GTATTTGGTG
TGTGGTTTTG CCGCCGCTGC AACTCAAATT GCTGCTGATC CTGGCTCGAA TATTTATATG
GTTGGTGCAA GTGGTGCCAT TGCTGGGTTA TTTGGCATGT ATTTAATGTG GTTTAGACAT
GCGAGTCTGA CTTTCATGTT TATCATTTAT CAGAAGAAGC TTTCGCCTAT GGCATTCTTC
AGCATCTGGT TAGTCTTTAA TATTATTGGT TTAATTATGG CTGGTGAAGG CGTTGCTTAC
TGGGCACATA TCGGTGGTTT TGTCGCGGGT CTGTTGATGG GTATTTTCCT AAAAGACAAA
GTGATGCAAG CTAATCCACT GATTGCTATG CTCAACGAAC CTGAGGTTAA GATAGCGCGC
TAA
 
Protein sequence
MSFKCPGCHN HKMREYEFHG EQVDTCEACG GLWFDNGELN KALSKADNGD DKVRVEETLG 
AHLGQAKRQC GHCEVSLERY HLMDGYQIEV DVCHSCSGIW IDRDESDKVV KSPLVKNLLA
ELDAKISTKT WIFQFLSQMP VEFNLKPKKP PVVTYLLLAL NILVFVGYGF DLDMTDNVFA
RFALRADDVM HGSHVWTLFS HMFLHGDLMH LAGNMYFLYV VGDNLEDALG RARFFVLYLV
CGFAAAATQI AADPGSNIYM VGASGAIAGL FGMYLMWFRH ASLTFMFIIY QKKLSPMAFF
SIWLVFNIIG LIMAGEGVAY WAHIGGFVAG LLMGIFLKDK VMQANPLIAM LNEPEVKIAR