Gene Sbal223_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0905 
Symbol 
ID7087266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1060616 
End bp1061194 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID643459819 
ProductSH3 type 3 domain protein 
Protein accessionYP_002356846 
Protein GI217972095 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000893023 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAAGAC TCCTGACTCT GGTGGGAATG ATGTTGCTGT CTTCCAACCT GCTGGCCGAA 
GGCCAATCCC GTTACATTTC GGATAACGTG TTCCTTTATC TTTTAGGTGG TCCTGGTACT
GAGTTCCGAA TTGTTGGCTC AATTGAAGCG GGTCAACCTG TGACACTGCT CAACGAAACC
CAAGGTGATT ACTCTAAAAT CATCGACCAT AAAGGCCGTG AAGGTTGGGT ACAAACTAAC
TTAATCAGCT CAACTCAAAG TTTCCGTGAA CAAGTGCCAG CGTTAACCAC TGAGCTTGCA
CAAGCTAAAG CTAAGCTAGC GGAAGTATCA AGTTCAACGG ATAACCACGC CGACGAAGTG
ACCGAATTGA AGGCTAAGCT AAGCGAGTTA GAAACAAACC TAGCCAAAAC CACTCAAGAA
CGTGATCAAC TGAAGAATGC TGTAGATCGC ACCGCCCAAG ACGAGCGTTT TGAACTTTGG
CGTCAAGGCG GGTTAATCGC AGGTTTGGGT TTAATCCTAG GCATTATTTT AGTGTATTTA
CCCAGACCAC AACGTCGCAG TAAAAAACGT TGGATGTGA
 
Protein sequence
MLRLLTLVGM MLLSSNLLAE GQSRYISDNV FLYLLGGPGT EFRIVGSIEA GQPVTLLNET 
QGDYSKIIDH KGREGWVQTN LISSTQSFRE QVPALTTELA QAKAKLAEVS SSTDNHADEV
TELKAKLSEL ETNLAKTTQE RDQLKNAVDR TAQDERFELW RQGGLIAGLG LILGIILVYL
PRPQRRSKKR WM