Gene Sbal223_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0871 
Symbol 
ID7087232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1023169 
End bp1024083 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID643459785 
ProductGlutamate--tRNA ligase 
Protein accessionYP_002356812 
Protein GI217972061 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.93825e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTT TATCTTCTCC AACTTCAACT CATCGCCCCT ATGTCGGCCG TTTTGCGCCT 
TCGCCTTCGG GTGCCTTGCA CTTTGGCTCG CTTATCGCCG CCCTTGGCAG TTATCTGCGT
GCGCGCTCGC AACAGGGTAA GTGGCTGATT CGTATTGAAG ACATCGATCC TCCACGGGAA
GTCAAAGGCG CCGCCGATGA TATCTTGCGC ACCTTAGAAG CCTATGGGTT TGAATGGGAT
GATGTGCCTC TGTATCAGAG CCAGCGCACT GCGGCCTATC AAGCACAAAT TGATTCGCTG
CTCGCCCAAG ATAAAGCCTA TTTCTGCCAA TGTAGTCGCA AGCAAATTCA AGCCATGGGC
GGCGTCTACG ATGGCCGCTG TCACCGCTTG CCACAAACCC AAGCTGCAAA TGTGGTTAAG
TCTGGGGCGG TGCGGATAGT CAATACCGCG CAAGTGCAGC AATTTGACGA TAACCTCATG
GGGCATATTC GCGTCGATAG CCATTTTGCC GCCGAGGATT TCATCATCAA ACGTAGCGAT
GGCCTATACG CCTATCAATT GGCCGTGGTG CTCGACGATG CCTATCAAGG GATCACTGAA
GTGGTTAGAG GTTGTGACTT AATCGAAGCC AGTTGTCGCC AACTGAGTTT GTATCAAAAC
TTTGGCTTGG CTGCACCGCA ATGGTTGCAC TTGCCGCTTG CCTGTTTGAG CAAGGGATTT
AAACTCTCCA AACAGAATCA TGCGCAGGCG ATTGATACGC TTCATCCGCA GTCGAGCCTC
AATGCGGCGC TGGCATTTTT AGGTCAACAA ACTGTTGAGA CCCAAGGTTC TGTGGCGCAA
ATGCTCGTTC AAGCCGTGGA TCAGTTTCAA TTATCCACTA TACCGCAACA ATCTGAGATA
CTGATCGAGC CCTGA
 
Protein sequence
MATLSSPTST HRPYVGRFAP SPSGALHFGS LIAALGSYLR ARSQQGKWLI RIEDIDPPRE 
VKGAADDILR TLEAYGFEWD DVPLYQSQRT AAYQAQIDSL LAQDKAYFCQ CSRKQIQAMG
GVYDGRCHRL PQTQAANVVK SGAVRIVNTA QVQQFDDNLM GHIRVDSHFA AEDFIIKRSD
GLYAYQLAVV LDDAYQGITE VVRGCDLIEA SCRQLSLYQN FGLAAPQWLH LPLACLSKGF
KLSKQNHAQA IDTLHPQSSL NAALAFLGQQ TVETQGSVAQ MLVQAVDQFQ LSTIPQQSEI
LIEP