| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0834 |
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| Symbol | |
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| ID | 7088067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 966222 |
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| End bp | 966953 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643459745 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_002356775 |
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| Protein GI | 217972024 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000360607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000221121 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAGTCC CAAGAATTTT TCAACCTCAG CCATTAGCCA TCAATCAACA GCTGAACTTA
GACGAAGATG GCGCGGCCCA TATCGGTAAA GTGCTGCGTA TGGGTAACGG CGAACATATC
AGCCTATTCA ATGGCGATGG CCATGATTAT CTTGCTGAAA TTGTCGATGC AGGTAAAAAG
CATGTCACAG TAAAACTGCT TTCCTGTGAG GTCAATTTAT CTGAGTCGCC ACTCAACTTG
CACTTAGGCC AAGTGATTTC CCGTGGTGAT AGAATGGAAT TCACCATTCA AAAATCGGTC
GAGCTGGGTG TGAATACCAT TACGCCGCTG TTTTCCGATC GCTGCGGCGT AAAACTCAAT
GGCGAGCGCC TAGAGAAAAA AATTCAGCAA TGGCAGAAAA TCGTTGTGAG CGCCTGTGAA
CAATCGGGCC GCAGCCAAGT GCCCGTAGTT CGCCCAGCGA TGGACTTACA CGATTGGTGC
AGTGAGCCAA CCTCGGCACT GAAACTCAAT TTACATCCAC GTGCCGCACA CGGCATCAAT
GGTTTAGATT TAGCGCACAC CCGCGTGCGC CTGTTAATTG GCCCAGAAGG TGGTTTGTCG
GCGGAAGAAA TCGCCATGAC AGAAACCTAT CAATTTACCG ATGTGTTGCT TGGCCCCAGA
GTGCTTCGCA CTGAAACCGC CTCGCTCACG GCCATTACGG CGCTGCAACT CAGATTTGGT
GATTTAGGCT AA
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| Protein sequence | MRVPRIFQPQ PLAINQQLNL DEDGAAHIGK VLRMGNGEHI SLFNGDGHDY LAEIVDAGKK
HVTVKLLSCE VNLSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLN
GERLEKKIQQ WQKIVVSACE QSGRSQVPVV RPAMDLHDWC SEPTSALKLN LHPRAAHGIN
GLDLAHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG
DLG
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