Gene Sbal223_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0834 
Symbol 
ID7088067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp966222 
End bp966953 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID643459745 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_002356775 
Protein GI217972024 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.60607e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.21121e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGTCC CAAGAATTTT TCAACCTCAG CCATTAGCCA TCAATCAACA GCTGAACTTA 
GACGAAGATG GCGCGGCCCA TATCGGTAAA GTGCTGCGTA TGGGTAACGG CGAACATATC
AGCCTATTCA ATGGCGATGG CCATGATTAT CTTGCTGAAA TTGTCGATGC AGGTAAAAAG
CATGTCACAG TAAAACTGCT TTCCTGTGAG GTCAATTTAT CTGAGTCGCC ACTCAACTTG
CACTTAGGCC AAGTGATTTC CCGTGGTGAT AGAATGGAAT TCACCATTCA AAAATCGGTC
GAGCTGGGTG TGAATACCAT TACGCCGCTG TTTTCCGATC GCTGCGGCGT AAAACTCAAT
GGCGAGCGCC TAGAGAAAAA AATTCAGCAA TGGCAGAAAA TCGTTGTGAG CGCCTGTGAA
CAATCGGGCC GCAGCCAAGT GCCCGTAGTT CGCCCAGCGA TGGACTTACA CGATTGGTGC
AGTGAGCCAA CCTCGGCACT GAAACTCAAT TTACATCCAC GTGCCGCACA CGGCATCAAT
GGTTTAGATT TAGCGCACAC CCGCGTGCGC CTGTTAATTG GCCCAGAAGG TGGTTTGTCG
GCGGAAGAAA TCGCCATGAC AGAAACCTAT CAATTTACCG ATGTGTTGCT TGGCCCCAGA
GTGCTTCGCA CTGAAACCGC CTCGCTCACG GCCATTACGG CGCTGCAACT CAGATTTGGT
GATTTAGGCT AA
 
Protein sequence
MRVPRIFQPQ PLAINQQLNL DEDGAAHIGK VLRMGNGEHI SLFNGDGHDY LAEIVDAGKK 
HVTVKLLSCE VNLSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLN
GERLEKKIQQ WQKIVVSACE QSGRSQVPVV RPAMDLHDWC SEPTSALKLN LHPRAAHGIN
GLDLAHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG
DLG