| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0826 |
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| Symbol | |
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| ID | 7088059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 954774 |
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| End bp | 956822 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643459737 |
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| Product | ABC transporter related |
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| Protein accession | YP_002356767 |
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| Protein GI | 217972016 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.018784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000432999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACAACGG CATTACTTGA AATTTCAGGT TGTTATCGCA CTTTTCAGGC GGGTGAGCAG
CAACTTACTG TCTTGAAAGA TGTGAACCTG TCGATTGGCC GTGGCGAGAT GGTGGCGATA
GTGGGCGCCT CTGGCTCGGG TAAATCGACC CTAATGAATA TTCTTGGTTG TTTAGATAAA
CCGTCAAAGG GCGCGTATTT TATCAATGGC CAAGATACCT CAACGATGGA CGTGGATGAG
TTGGCGCAGC TGCGCCGCGA GCACTTTGGC TTTATCTTTC AGCGTTATCA TTTACTGGGC
GATTTAACCG CCATAGGCAA CGTCGAAGTG CCTGCTGTGT ATGCGGGTAA AGAGCGCACG
GTGCGTAAAG ACAGAGCCGA GCATTTGTTA ACGCGTTTAG GCCTTGGCGA CAGGCTTGAC
CATAAACCCA ATCAGCTCAG TGGTGGTCAA CAGCAGCGGG TTAGTGTGGC GCGAGCCTTG
ATGAATGGCG GCGATGTGAT CCTCGCCGAT GAGCCAACAG GTGCACTGGA TAGTCACAGC
GGCGAAGAAA TGATGCAACT GTTGCAGGAG CTGCACAGCG ACGGTCATAC CATCATTATC
GTGACCCACG ATATGCACGT GGCCCAATAT GCCGACCGCA TTATCGAAAT CAAAGACGGC
GTGATCATCA GCGATGAGCG CAGTCAGGAT AAACAGACGG CTAAGCCGCA AAGCTCGACG
TCACAACATT CGACATCACA AAACACGACC TCCCAAAATA CGGCGTCACA AAAGCCTAAC
GGCACTGTGG TCGCAAAAAC AGTGGCTGCA AAAGACAGCT CGCGTGCGCG GGTGGCTTCG
TGGGACAGAT ATGTCGAAGC GCTTAAAATG GCGCTGGTGG CTATGTCGAC CCACAGGTTA
CGTACCTTTT TGACTATGCT CGGGATTATT ATCGGTATCG CCTCAGTGGT TTCTGTGGTG
GCCTTAGGTG AAGGCTCGCA GCAGGCCATT CTCAAAAGTA TCAGTTCGAT GGGAACCAAC
ACGATTGATA TTCGCCCAGG TTCAGGTTTT GGCGATCGAC GCTCGGCGCG GGTGCGTACC
TTAACGGCGA CCGATGCCAA TGCCCTTAAA AATCTACCCT ATGTCGATAG CGTGACCCCA
AGTATTGGCT CTAGCGCGAC GGTACGTTTT GGCAATAAAG CGGTATCGGC CTCGGTGAAT
GGTGTGGGGC CAGAGTTCTT TCGCGTGAGA GGTTACGAGT TAGCACAGGG GCAGTTTTGG
GATGATGCCA GCGTTGCAAC ACTCGCCCAA GATGCGGTGA TTGATGACAA CACCCGTAAG
GAGCTCTTTC CTAACAGTGC AGGCGCGAAT AACTCGGCCA TCGGCCAAGT GATTTTCCTC
GGGGATTTAC CCGTGCGCAT CATAGGTGTG ACGCAGCCAA AAGAAAGTGC CTTTGGTAAC
AGCGATGCGC TCAATGTGTG GGTGCCTTAC ACCACAGTTT CTGGCCGTAT GATAGGTAAA
AACTATTTGG ATGGTATCAC TGTGCGACTC GATGAAACTG TGCCGAGTAA TGCGGCGGAG
CAGGGCATTA TCGCGCTGCT TAAAATGCGC CACGGCACTC AAGATTTCTT TACCATCAAT
ACCGATACCA TTAGGCAGAA CATCGAAAAA ACCACAGCAA CCATGACCTT ACTGATCTCG
GCAATCGCGG TGATTTCCCT TGTCGTTGGC GGAATTGGGG TGATGAATAT TATGTTAGTG
TCTGTGACTG AGCGGACTCG TGAAATCGGG GTACGTATGG CAGTGGGCGC GCGTCAGAGT
GATATTTTGC GCCAGTTCCT TATCGAAGCC ATCTTAGTGT GTTTGTGTGG CGGAACCTTA
GGCATTGCTT TGTCCTACTT AATTGGCGTG GTGTTTGCTC AAACGGGAGG CAGTTTCCAA
ATGATTTATT CCACCACCTC CATCGTTGCC GCCTTTGCCT GTTCGACCTT AATTGGTGTG
CTATTTGGTT TCTTACCCGC CCGCAATGCG GCGCAGTTAG ATCCCGTTGA CGCATTAGCC
AGAGAGTAA
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| Protein sequence | MTTALLEISG CYRTFQAGEQ QLTVLKDVNL SIGRGEMVAI VGASGSGKST LMNILGCLDK
PSKGAYFING QDTSTMDVDE LAQLRREHFG FIFQRYHLLG DLTAIGNVEV PAVYAGKERT
VRKDRAEHLL TRLGLGDRLD HKPNQLSGGQ QQRVSVARAL MNGGDVILAD EPTGALDSHS
GEEMMQLLQE LHSDGHTIII VTHDMHVAQY ADRIIEIKDG VIISDERSQD KQTAKPQSST
SQHSTSQNTT SQNTASQKPN GTVVAKTVAA KDSSRARVAS WDRYVEALKM ALVAMSTHRL
RTFLTMLGII IGIASVVSVV ALGEGSQQAI LKSISSMGTN TIDIRPGSGF GDRRSARVRT
LTATDANALK NLPYVDSVTP SIGSSATVRF GNKAVSASVN GVGPEFFRVR GYELAQGQFW
DDASVATLAQ DAVIDDNTRK ELFPNSAGAN NSAIGQVIFL GDLPVRIIGV TQPKESAFGN
SDALNVWVPY TTVSGRMIGK NYLDGITVRL DETVPSNAAE QGIIALLKMR HGTQDFFTIN
TDTIRQNIEK TTATMTLLIS AIAVISLVVG GIGVMNIMLV SVTERTREIG VRMAVGARQS
DILRQFLIEA ILVCLCGGTL GIALSYLIGV VFAQTGGSFQ MIYSTTSIVA AFACSTLIGV
LFGFLPARNA AQLDPVDALA RE
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