| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0814 |
|---|
| Symbol | |
|---|
| ID | 7088047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 940722 |
|---|
| End bp | 941786 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643459725 |
|---|
| Product | porin Gram-negative type |
|---|
| Protein accession | YP_002356755 |
|---|
| Protein GI | 217972004 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000049607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000000354557 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CATTCATCTC TGCATCAGTT GCATCAGTAT TGGCATTGGC TTCATTCGGT
GCGCTAGCCG AAGGCCCAAG CTTTTATGGT CGTTTAGAGC TTGCTTTAAC CCATACTGAC
ACTGCTGCTA CCCTACAAGG CGGCACTAAC GGTATTGATA CTGCTAACTA TGCCGATGAA
AACAACGCTG GCACATACTT AGAAAACAAC TTTTCTCTGT TAGGTGTAAA GGGTTCAGAA
AAGATTGCTG ATGGCTTTGA AGCTATCTAT CAAATGGAAT TCCAAGTTGA AAATACATCA
ACAACGGGTG ATGTATTTAA AGCGCGTAAT ACTTATTTAG GTTTAAAAAC TAACGCAGGT
ACTGTGTTAG TGGGTCGTAA CGACACAGTA TTTAAACAAG CCGAAGGCGG TGTGGATATT
TTCGGTAACA CTAACGCCGA TATCGACCGT TTAATCAGTG GCCAAACTCG TAGCGCTGAT
GGTATGTGGT ACTACTCTCC AAAAATCGCT GGTTTAGTAA CACTGAACGC GACTTATTTG
TTTGATGATA ACGATACTAC TGCAAAAACG TCTGAAAGCT TATATGCATT AAGCGCGACT
TTAGGCGATA AAGCGTTTAA AGATCAAAAC TACTACGTCG CTGTAGCCTA TAACAAAGGT
ATTTCAGGCA TTGATGCATA CCGTGGTGTG GCTCAAGTTA AATTAGGCCA ATTCAAAGTC
GGTGGTTTAT TCCAACAATC AGAAAATGTT GTGAATAGCG ATATCGATGG CAATACTTAC
TTCGTGAACG TTTCTTACGA TCTGAACGGC GTAAACTTGA AAGCTGAATA CGGTGCTGAT
GATGCTGGCT TCGGTAACTT CTACAAAAAC GTTAATAAAG GTGGCGCAAC TGGCACTGAT
ATCAACGTAC AAAACTTCAA CGTAGGTGCT GACTACCGTT TAGCTAAATC AACTATGGTA
TACGGCCAAT ACGCTATGTA CCGCGGTGAC CATGTTGTTG CTGGTAACAA AGTTGATCTA
CAAGATGACA ACGTATTCTC TGTAGGCGTA CGTTACGACT TCTAA
|
|---|
| Protein sequence | MKKTFISASV ASVLALASFG ALAEGPSFYG RLELALTHTD TAATLQGGTN GIDTANYADE
NNAGTYLENN FSLLGVKGSE KIADGFEAIY QMEFQVENTS TTGDVFKARN TYLGLKTNAG
TVLVGRNDTV FKQAEGGVDI FGNTNADIDR LISGQTRSAD GMWYYSPKIA GLVTLNATYL
FDDNDTTAKT SESLYALSAT LGDKAFKDQN YYVAVAYNKG ISGIDAYRGV AQVKLGQFKV
GGLFQQSENV VNSDIDGNTY FVNVSYDLNG VNLKAEYGAD DAGFGNFYKN VNKGGATGTD
INVQNFNVGA DYRLAKSTMV YGQYAMYRGD HVVAGNKVDL QDDNVFSVGV RYDF
|
|---|
| |