Gene Sbal223_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0814 
Symbol 
ID7088047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp940722 
End bp941786 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content42% 
IMG OID643459725 
Productporin Gram-negative type 
Protein accessionYP_002356755 
Protein GI217972004 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.9607e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.54557e-12 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAAGA CATTCATCTC TGCATCAGTT GCATCAGTAT TGGCATTGGC TTCATTCGGT 
GCGCTAGCCG AAGGCCCAAG CTTTTATGGT CGTTTAGAGC TTGCTTTAAC CCATACTGAC
ACTGCTGCTA CCCTACAAGG CGGCACTAAC GGTATTGATA CTGCTAACTA TGCCGATGAA
AACAACGCTG GCACATACTT AGAAAACAAC TTTTCTCTGT TAGGTGTAAA GGGTTCAGAA
AAGATTGCTG ATGGCTTTGA AGCTATCTAT CAAATGGAAT TCCAAGTTGA AAATACATCA
ACAACGGGTG ATGTATTTAA AGCGCGTAAT ACTTATTTAG GTTTAAAAAC TAACGCAGGT
ACTGTGTTAG TGGGTCGTAA CGACACAGTA TTTAAACAAG CCGAAGGCGG TGTGGATATT
TTCGGTAACA CTAACGCCGA TATCGACCGT TTAATCAGTG GCCAAACTCG TAGCGCTGAT
GGTATGTGGT ACTACTCTCC AAAAATCGCT GGTTTAGTAA CACTGAACGC GACTTATTTG
TTTGATGATA ACGATACTAC TGCAAAAACG TCTGAAAGCT TATATGCATT AAGCGCGACT
TTAGGCGATA AAGCGTTTAA AGATCAAAAC TACTACGTCG CTGTAGCCTA TAACAAAGGT
ATTTCAGGCA TTGATGCATA CCGTGGTGTG GCTCAAGTTA AATTAGGCCA ATTCAAAGTC
GGTGGTTTAT TCCAACAATC AGAAAATGTT GTGAATAGCG ATATCGATGG CAATACTTAC
TTCGTGAACG TTTCTTACGA TCTGAACGGC GTAAACTTGA AAGCTGAATA CGGTGCTGAT
GATGCTGGCT TCGGTAACTT CTACAAAAAC GTTAATAAAG GTGGCGCAAC TGGCACTGAT
ATCAACGTAC AAAACTTCAA CGTAGGTGCT GACTACCGTT TAGCTAAATC AACTATGGTA
TACGGCCAAT ACGCTATGTA CCGCGGTGAC CATGTTGTTG CTGGTAACAA AGTTGATCTA
CAAGATGACA ACGTATTCTC TGTAGGCGTA CGTTACGACT TCTAA
 
Protein sequence
MKKTFISASV ASVLALASFG ALAEGPSFYG RLELALTHTD TAATLQGGTN GIDTANYADE 
NNAGTYLENN FSLLGVKGSE KIADGFEAIY QMEFQVENTS TTGDVFKARN TYLGLKTNAG
TVLVGRNDTV FKQAEGGVDI FGNTNADIDR LISGQTRSAD GMWYYSPKIA GLVTLNATYL
FDDNDTTAKT SESLYALSAT LGDKAFKDQN YYVAVAYNKG ISGIDAYRGV AQVKLGQFKV
GGLFQQSENV VNSDIDGNTY FVNVSYDLNG VNLKAEYGAD DAGFGNFYKN VNKGGATGTD
INVQNFNVGA DYRLAKSTMV YGQYAMYRGD HVVAGNKVDL QDDNVFSVGV RYDF