Gene Sbal223_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0533 
Symbol 
ID7089264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp610832 
End bp611971 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content49% 
IMG OID643459460 
ProductABC-2 type transporter 
Protein accessionYP_002356490 
Protein GI217971739 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAC TGATATTAAC TGAACTTAAG GCCATTATTA GCGATAAAGC GATCGCAGTG 
ACCTTGTTTG GTGGTGTGCT GTTTTATTCG ATTTTGTATC CCTTACCCTA TTTAAACCAA
GTGCCGACCG AGCAACAACT GATCGTGGTG GACTTAGATC ATTCGTCCTT AAGCCGCCAG
TTGATCCGCC ACGCTGACGC CAGTGCAAAA ATCCAAGTCA TAGGCCAAGT CGGTTCGATT
ACCGAGGCGA AGCGTTTTAT TGAGACGCGC AAGGCCCACG GCTTACTGGT GATCCCAGAA
GGTTTCCGCC GCGACTTAAT GCTGGGTAAG GGAGTGACGT TAAGTTATGG CGGCGATGCC
AGTTATTTCC TGATTTACTC TGCGGTTGTC GAAGGCTTAG TGAGCGCGGG TATGGACGCG
GGCAAGCAAG TGCAATTGAT TGGCATGTTG GTCCAAGGCA CAAACCCTAA ACAGGCCCAA
GAGAGTGTAA ACTCAATTCA CCTCAATAGC GTGCCCGCCT TTAACCCAAG CCTAGGTTAT
ACGCCCTATG TAGTACCTGG ACTATTTTTG CTGATCTTGC ATCAAACCTT GCTCATAGGC
ACAGGTATTT TAGGGGCAGG GCAATGGCGC CAGAAAGGCT ATTGGCAGCA GGTCTCGCCT
GTACAACTCT TATGTGGGCG AATACTCGCC TTCATGTTGA TTTATCTCTT CTTTACCAGC
TTTTACGTCG GCTATTGTTA TCACTGGTAT CACGTCAGCA TTCAGGCGAG TCTGGGTGTT
GTCGCGTTAT GGTTGTTACC TTTTTTATTG GCTACCGCTG CTGCTGGGGT CGCCATGAGC
ACCTTGTTTA CCCGTCGCGA TTTACCGACC CAAGTGCTGC TGTTGATTTC AATGCCGATC
CTATTCGTGT CTGGTTTTGT CTGGCCGATA GCGCTCATCC CCGAACCGTT AGTATTAGGT
TCGCAGTTTA TCCCTGCCGT ACCCGCAATT ATGGGGATGT TAGAACTCAA TCAAATGGGC
GCAAGTTGGT CTAGTGTGAT GCCCAAGTGG CTACAACTCT GGGGCTTATT TGCCGTCTTT
TTTGGCTTAG CGATCTTGGG TATTAAGCGC AGGGCGAGAT TGTTGGCTGA AGTGGGTTAG
 
Protein sequence
MWRLILTELK AIISDKAIAV TLFGGVLFYS ILYPLPYLNQ VPTEQQLIVV DLDHSSLSRQ 
LIRHADASAK IQVIGQVGSI TEAKRFIETR KAHGLLVIPE GFRRDLMLGK GVTLSYGGDA
SYFLIYSAVV EGLVSAGMDA GKQVQLIGML VQGTNPKQAQ ESVNSIHLNS VPAFNPSLGY
TPYVVPGLFL LILHQTLLIG TGILGAGQWR QKGYWQQVSP VQLLCGRILA FMLIYLFFTS
FYVGYCYHWY HVSIQASLGV VALWLLPFLL ATAAAGVAMS TLFTRRDLPT QVLLLISMPI
LFVSGFVWPI ALIPEPLVLG SQFIPAVPAI MGMLELNQMG ASWSSVMPKW LQLWGLFAVF
FGLAILGIKR RARLLAEVG