| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0511 |
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| Symbol | |
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| ID | 7088425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 582478 |
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| End bp | 584238 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643459438 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002356468 |
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| Protein GI | 217971717 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA GATTAAAAAT GCGTTTGGGC GATCTGTTAG TTCAAGAAGC CATTATTACC
GAAGCGCAGT TGCAACAGGC GTTAGGCGAG CAGCGTAATA CGGGCAAAAA ACTGGGTCGT
ACCCTCATTG ATCTGCAATC GATTACAGAG CATCAGTTGC TGCAGTTCTT GTCGCAACAA
TTGAATGTGC CTTTGCTCGA TATCAGTAAA ATGCCAATCC CAGCGGAAGT CGTGCATCTG
ATTCCTGAGG TGCAAGCCCG ACGTTTCCGC GCTTTAGCGG TTGAAGACAG GGGCGATAGC
GTACTGGTTG CAATGAGTGA TCCTGCCGAT TTGCAGGCGC TCGATCACCT CGAAATGCTT
ATCGCACCTA AGCGTTTGAA GTTAGCGGTA GCGCCCGAGC AGCAACTGCT GCAAGCGTTT
GATAACTTAT ATCGCCGTAC AGATCAAATT GCTCAGATCG CCGGTAAGCT CGAAGAAGAA
TACGCCGCCG ATGAGATGTT CGATTTAGCC AGTCTGACTT CGGGTGACAG TGACAATGAA
ACCACAGTGG TTAAGCTGCT GCAGTCGATT TTTGAGGATG CGGTGCAAAT GCGCGCCTCG
GATATCCATA TCGAACCCGG TGATAAAGCC CTACGTATTC GCCAGCGTAT CGATGGCCAG
CTACACGAAA CGATTCTGAA TGAAGTTAAT ATTGCCGCGG CTTTAGTATT GCGACTTAAG
TTGATGGCTG GACTCGATAT TTCAGAAAAA CGTTTGCCGC AGGATGGCCG TTTTCATATG
GAAATTAAAG GTCACCATAT CGATGTGCGT ATGTCGACCA TGCCGATTTA CCACGGTGAA
TCTGTGGTAA TGCGTTTACT CGACCAATCG GCGGGGTTAT TGACCCTAAA CGAAACTGGT
ATGCCACCCG CAATTTTGGC GCGTATTCGT AAACAGATTA AACGTCCCCA CGGCATGTTG
TTGGTCACTG GCCCCACGGG TAGCGGCAAA ACGACCACCT TGTACGGTAT TTTGAGCGAG
CTCAACACCG CCGACCGTAA GATCATCACG GTGGAAGATC CGGTCGAGTA TCAATTGCCA
CGGATAAACC AAGTGCAAGT TAACCATAAG ATTGGCTTGA ACTTTTCCAA CGTATTGCGC
ACCACCTTGC GTCAAGACCC CGATATCATC ATGGTCGGGG AAATGCGTGA TCAAGAAACC
GTTGAGATTG GCCTGAGGGG CGCATTAACG GGTCACTTTG TGTTATCGAC CTTGCACACT
AACGATGCGG TCACCAGTGC GCTGCGTTTA CTCGATATGG GCGCTGCGAG TTATTTAGTT
GCCAGTGCCT TAAGGGTGAT TATTGCCCAG CGTTTAGTGC GCCGCGTTTG CCATAACTGT
GGCGTTGAGT ATCAGCCGAC ACCGCAGGAA AAAGCCTGGC TGAGTAGCGT GAGTCGTAAA
GATTTTAGCC ATGCAAACTT TAGAATCGGT ACCGGTTGCC AGAGTTGTAA CGGCAGTGGT
TATCGTGGCC GTATTGGTAT TTTTGAGATC CTCGAGCTCG ACGAAAAGAT GATCGATGCG
ATGCGTACCG GTAATCCGCA GGATTTCGCC AGAGCCGCGT TGCAGAGCCC TAACTTCACC
CCGCTTGCCG AGTCAGCTTT GCAATATCTG AGCGAAGGCA TGACGACCAT TGAAGAGGTG
GCTAAGCTGG TGGAAGACGT GAGTGAATCT CAGATACCTT TGTCGAAGGA TATTATTAGC
CAACAAGGCG TTGAGGCGTA A
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| Protein sequence | MKPRLKMRLG DLLVQEAIIT EAQLQQALGE QRNTGKKLGR TLIDLQSITE HQLLQFLSQQ
LNVPLLDISK MPIPAEVVHL IPEVQARRFR ALAVEDRGDS VLVAMSDPAD LQALDHLEML
IAPKRLKLAV APEQQLLQAF DNLYRRTDQI AQIAGKLEEE YAADEMFDLA SLTSGDSDNE
TTVVKLLQSI FEDAVQMRAS DIHIEPGDKA LRIRQRIDGQ LHETILNEVN IAAALVLRLK
LMAGLDISEK RLPQDGRFHM EIKGHHIDVR MSTMPIYHGE SVVMRLLDQS AGLLTLNETG
MPPAILARIR KQIKRPHGML LVTGPTGSGK TTTLYGILSE LNTADRKIIT VEDPVEYQLP
RINQVQVNHK IGLNFSNVLR TTLRQDPDII MVGEMRDQET VEIGLRGALT GHFVLSTLHT
NDAVTSALRL LDMGAASYLV ASALRVIIAQ RLVRRVCHNC GVEYQPTPQE KAWLSSVSRK
DFSHANFRIG TGCQSCNGSG YRGRIGIFEI LELDEKMIDA MRTGNPQDFA RAALQSPNFT
PLAESALQYL SEGMTTIEEV AKLVEDVSES QIPLSKDIIS QQGVEA
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