Gene Sbal223_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0508 
Symbol 
ID7086984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp578538 
End bp580217 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content48% 
IMG OID643459435 
Productpilus (MSHA type) biogenesis protein MshL 
Protein accessionYP_002356465 
Protein GI217971714 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID[TIGR02519] pilus (MSHA type) biogenesis protein MshL 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA TTAAATACTT TACACCTCTG CTCTCACTTT GCCTTGTGGC GTGTCAGACC 
ACAAATAGGC CACAGCCGGA GGCGAGTAAG GCGGAATTAG CGGCCTCAAT GGCGACAGCG
ACGGCATCAA CGACGCCACC GCCTGCGACT ATGCCGGATG CGGTTCAGCG AGAATTGAAT
TCGGGCGCTT TACTGTCAGG TTTAACCCCT GCGCTAGAAA CTGAGCGTCG TTTTGATGTC
TCTGCCCATG ATGTGGATGC CAAAGTATTT TTTCCAAGCT TAGTCCAAGG TACGCCGCTG
AGTGTTGCCG TGCATCCTGA TGTGCAAGGT ACGATTTCGC TATCCCTTAA AGGTGTAACC
TTAAGCGAAG CGATTCAAGT GGTTGAAGAT ATCTACGGTT ACGAAGTGAG CCGTGAAGGG
CGTATTCTAA GAGTGTTCCC CGCTGGAATG CGTACTGAGA CTTTCCCGCT GAATTATCTT
TATATGGAGC GCGACGGCTT ATCAGTGACC TCTGTGAGTT CTGGACGGAT TTCTGATAGC
AATAATTCCA ATAGTAATTC GAGCAATAAC AACTCAAATA ACAGTGGTTC GAGTAATAAT
AATTCCAACA GCAGTAATGG TAGTAACTCC AGCAGCAATG GCAGCAGCGA TAGCAGTAAC
GGTACCTTTA TCCGCTCGCG CACTAAGACT GATTTTTGGG GCGAGCTGAA AGAAACGTTG
ACGGCGATTA TTGGTGACAC AGGAAATGGG CGGCAAGTGG TGGTCACGCC GCAGGCGGGT
TTAGTGACCA TTCGTGCTTT CCCAAGTGAA TTACGCCAAG TTCGCACTTT CTTAAATTCT
GCCGAGAGTC ATCTGCAGCG CCAAGTGATC TTAGAAGCTA AGATCATCGA AGTCACATTA
TCCGATGGCT ATCAGCAGGG CATCCAATGG GACAATGTGC TTGGTCATGT TGGCAATACG
AATGTGAATT TTGGGACTTC GAAAGGCCCA GGCTTAAGCG ATAAAATCAC CTCGGCGATT
GGTGGCGTGA CCTCGCTGAG CATTAAAGGC TCCGACTTTA CGACCATGAT CAATCTGTTA
GATACCCAAG GCGATGTGGA TGTATTGTCT AGCCCAAGGG TAACAGCATC GAATAACCAA
AAAGCGGTGA TTAAAGTCGG TACCGATGAG TATTTTGTCA CTGACGTTTC ATCGACGACA
GTTGGTGGCA CGCCGCCTGT GACCACTCCG CAAGTCGAGC TTACGCCGTT TTTCTCAGGC
ATTGCCTTAG ATGTCACGCC GCAAATTGAT AGTGACGGCA ATGTGTTATT GCACGTGCAT
CCATCCGTTA TCGATGTGAA AGAGCAGACT AAAGACATCA AAGTGAGTGA CGCTTCGTTG
GAGCTACCTT TAGCACAGAG TGAAATTCGC GAGTCTGATA CCGTTATCCG CGCCGCTTCC
GGTGACGTAG TCATCATCGG TGGTTTGATG AAGAGTGAAA GCATTGAAGT GGTATCGCAA
GTGCCCTTGT TGGGTGATAT TCCCTACCTC GGTGAATTGT TTAAAAACCG TAGCAAGCAA
AAGAAAAAAA CCGAGTTGAT TATTCTGTTA AAACCTACGG TAGTTGGCGT CGATACTTGG
AAAACTGAGC TACAACGTTC TAAGACCTTA TTAGATCGTT GGTATCCGGA GACAAAGTAA
 
Protein sequence
MKAIKYFTPL LSLCLVACQT TNRPQPEASK AELAASMATA TASTTPPPAT MPDAVQRELN 
SGALLSGLTP ALETERRFDV SAHDVDAKVF FPSLVQGTPL SVAVHPDVQG TISLSLKGVT
LSEAIQVVED IYGYEVSREG RILRVFPAGM RTETFPLNYL YMERDGLSVT SVSSGRISDS
NNSNSNSSNN NSNNSGSSNN NSNSSNGSNS SSNGSSDSSN GTFIRSRTKT DFWGELKETL
TAIIGDTGNG RQVVVTPQAG LVTIRAFPSE LRQVRTFLNS AESHLQRQVI LEAKIIEVTL
SDGYQQGIQW DNVLGHVGNT NVNFGTSKGP GLSDKITSAI GGVTSLSIKG SDFTTMINLL
DTQGDVDVLS SPRVTASNNQ KAVIKVGTDE YFVTDVSSTT VGGTPPVTTP QVELTPFFSG
IALDVTPQID SDGNVLLHVH PSVIDVKEQT KDIKVSDASL ELPLAQSEIR ESDTVIRAAS
GDVVIIGGLM KSESIEVVSQ VPLLGDIPYL GELFKNRSKQ KKKTELIILL KPTVVGVDTW
KTELQRSKTL LDRWYPETK