Gene Sbal223_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0493 
Symbol 
ID7086969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp562405 
End bp562875 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content50% 
IMG OID643459420 
Productprotein of unknown function DUF107 
Protein accessionYP_002356450 
Protein GI217971699 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.58021e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTT CAAATCCGAT TTTAGTGTGG GCAGTGGTGG GGCTAGTATT TATGCTTGCC 
GAAATAGTGG TTCCCGGTGG CATCATAGTG TTGCTGGGCG CGGCTTGTTT AGTCGTGGCT
GGCGCGTTAG GCATAGGACT AGTCGAAGGC GTAGTGCAGA GCATGACCCT GTGGTTTATC
TCGGCCATTG TGTTGTTATT GACCTTCAGA CAAGTGACTC AAAGGCTCGT TGGTGGTGAT
TCCCATGTGG ATAACACGGA TGAAGCAATC GATCTATACA ATCAAATTGT TCGCGTAAAG
CAGACCATAG GTCCTGGGCA AGCACCCGGG CGGGTGGAAT TTCAGGGGAG TGAATGGCCA
GCGCTGGGCG ATGGCACCAC TATCGCTGCG GGGACCGAAG TCAGAATTAT TTGTCGTGAA
AATATCGCTC TAGTCGTTGA GCCTATTTCA ATAGAAGCTT CCAAAAACTA A
 
Protein sequence
MEFSNPILVW AVVGLVFMLA EIVVPGGIIV LLGAACLVVA GALGIGLVEG VVQSMTLWFI 
SAIVLLLTFR QVTQRLVGGD SHVDNTDEAI DLYNQIVRVK QTIGPGQAPG RVEFQGSEWP
ALGDGTTIAA GTEVRIICRE NIALVVEPIS IEASKN