| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0492 |
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| Symbol | |
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| ID | 7086968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 561178 |
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| End bp | 561930 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643459419 |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | YP_002356449 |
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| Protein GI | 217971698 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000160917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA CATGCCTATG CCTAGCACTC ATGCTTTCTC CTCAAGCATT TGCGGGTGAC
TTAGTACAAT GGTGGGATTT CAGTGCAACA GCCCTCTATG GCGAAGACTA CGATTTAACA
CCATCGGACA AACAAGCCAC TATCACCTTA GAAACGGCGG GCGGCTGGAA ATACGGTGAT
TGGTTTGCCT TCCAAGACTT TATCTATTTC AAAGGCAACG ATACAGGCAT GGAAAGCACT
ACCTATGGTG AGATTTCGCC ACGCTTCAGT GCCAGCAAAA TCCTCGGCGA GAAAATCGCC
TTTGGCCCAG TGACAGATTT GTCTCTGGCG CTGACCTATG AAGAAGGTGA AGGCCCAGTT
CACAGCCTGC TTTACGGTTT AGGCGTTGAT GTCGCCGTGC CTTATTTCAC TTACCTGAAC
TTTAATACCT ATCGCCGCAA TGGCATGAGC ACAGGTAACA ACAGTGACGG CTGGCAGTTC
ACCCCAGTAT TTCGCATCGA TATTCCCGTT GGCTCAGCCA ACATAGTGCT CGATGGCTTT
ATCGACTGGG TATTTGCCAC AGATGATAAT GGCTACGAGG AGAACTTCCA CCTCAACCCA
CAGCTGAAAT ACGATCTTGG TAAGAGTTTG TTCGGTGATC ATCAAGCCAA TAAATTATTG
GTGGGTATCG AATACGATTT GTGGACCAAT AAATACGGTG TGAAAGGCGT CGATCAAGAC
ACTTACTCTG TGATTGCCCA GTACCACTTC TAA
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| Protein sequence | MKKTCLCLAL MLSPQAFAGD LVQWWDFSAT ALYGEDYDLT PSDKQATITL ETAGGWKYGD
WFAFQDFIYF KGNDTGMEST TYGEISPRFS ASKILGEKIA FGPVTDLSLA LTYEEGEGPV
HSLLYGLGVD VAVPYFTYLN FNTYRRNGMS TGNNSDGWQF TPVFRIDIPV GSANIVLDGF
IDWVFATDDN GYEENFHLNP QLKYDLGKSL FGDHQANKLL VGIEYDLWTN KYGVKGVDQD
TYSVIAQYHF
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