Gene Sbal223_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0462 
Symbol 
ID7086938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp528868 
End bp529782 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID643459389 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002356419 
Protein GI217971668 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA TCATGGTAAC AGGCGCGACT GGGCTACTCG GCCGAGCTGT TGTAAAACAG 
CTTGAATTAA CGGGACATGA GGTTGTGGCT ACAGGTTTTA GCCGCGCAAG TGAGCGAGTG
CATAAACTCG ATCTCACAGC CCCTTTGGCT GTCGAGGCAT TTATCGCCCG CGAACAACCG
CAAGTCATAG TGCACTGCGC CGCCGAGCGT CGCCCCGATG TGTCGGAGCA AAATCCGCAG
GCGGCATTGG CACTTAACTT AACTGCTAGC CAAGCCCTCG CTATGGCAGC TAAGGCCAAT
AACGCTTGGC TTATCTATAT TTCTACTGAC TATGTGTTCG ATGGCACTCA GCCTAAGTAC
GCCGAAGATG CCGCCACTGA TCCGGTTAAT TTTTATGGTG AATCTAAGCT AAAGGGCGAA
GAAATCGTGC TTAACACGAG TGCTGATTTT GCCGTGCTAC GCTTGCCAAT CCTTTACGGC
CAAGTCGAGA AGCTGAGTGA ATCTGCTGTG CTAGTGCTGG TTAACCAATT GATTGAACGT
CGGGCTCAGG GTGTCGATCA TTGGGCCGTG CGAAGTCCAA CTTCGACCGC CGATATTGCC
CAAGCCATAG ATAAGATGAT TGCACAACAT ATTGAAGCGC CTATCGTGCA GGGGATTTAT
CACTTTAGCG CCGCAGAGAC CATGACTAAG TATCAGATGC TGCTGACCCT TGGGGATATT
CTCCAACTCA GTACGGCGCA CTTAACGCCT GAGTCGACAC CGACGGATAA TGCCAAACGG
CCAAGGGACT GTAGCTTGAG TTGTGCACGT TTAGCTGCGC TCGGTATTCG TACTGACATT
GATTTCGCCA CTGGCGCTCG CCAAGCATTA ACGCAATCGA GTGGCGCACT GGCCGCACTC
GGACTCACAC TGTAG
 
Protein sequence
MAKIMVTGAT GLLGRAVVKQ LELTGHEVVA TGFSRASERV HKLDLTAPLA VEAFIAREQP 
QVIVHCAAER RPDVSEQNPQ AALALNLTAS QALAMAAKAN NAWLIYISTD YVFDGTQPKY
AEDAATDPVN FYGESKLKGE EIVLNTSADF AVLRLPILYG QVEKLSESAV LVLVNQLIER
RAQGVDHWAV RSPTSTADIA QAIDKMIAQH IEAPIVQGIY HFSAAETMTK YQMLLTLGDI
LQLSTAHLTP ESTPTDNAKR PRDCSLSCAR LAALGIRTDI DFATGARQAL TQSSGALAAL
GLTL