Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0411 |
Symbol | |
ID | 7089549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 458149 |
End bp | 459717 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459331 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_002356368 |
Protein GI | 217971617 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000204337 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTAACA GAGTAATTAT ATTTGATACG ACCTTACGTG ATGGTGAGCA GGCGTTAGCC GCAAGCCTTT CGGTCAAAGA AAAGTTACAG ATCGCCATGG CGCTGGAACG TCTAGGTGTT GATGTGATGG AAGTGGGTTT TCCAGTCTCA TCACCCGGTG ATTTTGAGTC GGTGCAAACC ATAGCGCGCA CCATCAAAAA TAGCCGCGTT TGTGCGTTAT CCCGCGCACT TGAAAAGGAC ATCGATGCTG CGGCGCAGGC CTTGTCTGTT GCAGATCAAT TCCGTATCCA TACGTTTATC TCGACATCGA CGATTCATGT GGAAAGCAAG CTGAAGCGCT CGTTTGATCA AGTGTTAGAG ATGGCGGTGG GCGCAGTGAA ATACGCCCGT CGCTTTACCG ACGATGTGGA GTTTTCCTGT GAGGATGCGG GACGTACGCC AATCGACAAT CTGTGTCGTA TGGTAGAGGC CGCCATTCTT GTTGGCGCGC GTACCATTAA CATTCCTGAT ACGGTCGGTT ACACAGTGCC AAGCGAGTTT GGTACTATTA TCCAAACCCT GTTTAACCGC GTGCCGAACA TCGACCAAGC GGTGATCTCA GTGCATTGCC ACGATGACTT AGGTTTATCT GTGGCTAACT CGATAACCGC AGTGCAACAC GGTGCACGTC AAATCGAATG TACGATCAAT GGCATAGGTG AGCGTGCGGG TAACTGTTCA TTGGAAGAGA TCGCTATGAT TTTAGCGACG CGTAAGGGCA TGTTGGGTTT GGAAACAGGC ATTAACGCCA AGGAAATCCA CCGTACTTCT AATTTAGTCA GCCAGTTATG CAACATGCCA GTGCAGGCGA ACAAGGCGAT TGTCGGTGCC AATGCCTTTA CCCATTCGTC GGGTATCCAT CAGGATGGCA TGTTAAAAGC GCAAAATACC TATGAAATCA TGACCCCAGA AAGCATAGGT TTGAATCGCA ACAATTTGAA TATGACTTCG CGCTCAGGTC GCCATGTGAT CAAGCATCGC ATGGAGGAAA TGGGTTATAG CGAGCACGAT TACAATATGG ATGCGCTGTA CGAAGAGTTC CTAAAATTGG CGGATAAAAA AGGCCAAGTA TTTGATTATG ATTTAGAAGC CTTAGCCTTT ATGGAAGCAC AGGCCGAAGA AGACAATCAC TATCAATTGC AGCAATTAGT GGTGCAGTCT GACTCTACCG AAGGCGTTGC CACAGCTACC GTTCGTATTG AAGTGGGCGG TGAAATTAAA ACCGAAGCCG CAACTGGCAA TGGTCCCGTT GATGCCGCCT ATAACGCCAT TGCCCGTGCT ACTGATCGTC GTATCGACAT CATCAGCTAC AAGTTAGGCG CTAAGGGCGT AGGCCAAAAT GCCTTAGGTC AAGTGGACAT TACCGCGGTT TACCACGAGC AAAACTTCCA CGGTGTAGGT TTAGCGACCG ATGTCGTTGA AGCCTCGGCG CGCGCTTTAG TGCATGTGAT GAACTTAACG TGCCGTGCAG ACAAGGTCGC CGATTACAAA CAAAGCATGC AAAAGAATCG AGAGCTAGGC GGCGTCTAG
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Protein sequence | MSNRVIIFDT TLRDGEQALA ASLSVKEKLQ IAMALERLGV DVMEVGFPVS SPGDFESVQT IARTIKNSRV CALSRALEKD IDAAAQALSV ADQFRIHTFI STSTIHVESK LKRSFDQVLE MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEAAIL VGARTINIPD TVGYTVPSEF GTIIQTLFNR VPNIDQAVIS VHCHDDLGLS VANSITAVQH GARQIECTIN GIGERAGNCS LEEIAMILAT RKGMLGLETG INAKEIHRTS NLVSQLCNMP VQANKAIVGA NAFTHSSGIH QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYSEHD YNMDALYEEF LKLADKKGQV FDYDLEALAF MEAQAEEDNH YQLQQLVVQS DSTEGVATAT VRIEVGGEIK TEAATGNGPV DAAYNAIARA TDRRIDIISY KLGAKGVGQN ALGQVDITAV YHEQNFHGVG LATDVVEASA RALVHVMNLT CRADKVADYK QSMQKNRELG GV
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