Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0407 |
Symbol | |
ID | 7089545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 452064 |
End bp | 452948 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643459327 |
Product | RarD protein, DMT superfamily transporter |
Protein accession | YP_002356364 |
Protein GI | 217971613 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0219498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000129202 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGATC TTGAATACCG CAAAGGGATC CTACTCGCCG TCAGTGCTTA CTGTATGTGG GGTTTTGCGC CTTTATATTT CAAATTACTC AACCATGTCT CTGCCACCGA AATTTTGCTC CATCGCGTAA TTTGGTCGTT CGTGTTTATG CTGATCATTA TGCAGTTTAT CGGCGGGTTC TCACGCTTAC GCTTACTGTT TAAACAACCT AAACAGCTGA TGGTTCTCAC CATTACTTCC ATACTGATTG CTGGAAACTG GCTGCTATTT ATCTGGGCGG TGAATAACGA TCACATGCTC GATGCCAGTT TAGGTTACTT TATCAACCCT CTACTCAACG TCTTGCTTGG CATGTTATTT CTAGGCGAAA GGTTACGTAA ATTGCAATGG TTTGCGGTCG CACTCGCCAG CGCTGGCGTG TTAATCCAAT TAATCTCTTT TGGCTCTATT CCGATTGTCT CACTGGCACT CGCGGGCACC TTTGGTTTCT ATGCGCTGCT GCGAAAAAAG GTAAATGTGG ATGCTAAGGC TGGCTTATTG GTCGAAACCG CAGTGTTATT ACCGGTCGCG CTAATTTACC TAGTCGCGAC CTTAGACACA GCGACAGCAA GCATGCTGAC AAACGATTGG CAACTTAATC TGATGTTAAT GGCAGCGGGA ATAGTGACCA CGATCCCTTT ACTCTGTTTT GCAGGGGCGG CGGTACGGAT CCCATTATCT ATGCTTGGAT TTTTCCAATA TATCGGCCCA AGTATCATGT TCATCCTCGC GGTGAGTCTG TTTAATGAGC CCTTCGATGC AGAAAAATGC GTGACCTTCG GTTTTATCTG GAGTGCCCTG TTAGTCTTTA CCTTAGATAT GGCCTATAAA CGCAAAACGG CGTGA
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Protein sequence | MQDLEYRKGI LLAVSAYCMW GFAPLYFKLL NHVSATEILL HRVIWSFVFM LIIMQFIGGF SRLRLLFKQP KQLMVLTITS ILIAGNWLLF IWAVNNDHML DASLGYFINP LLNVLLGMLF LGERLRKLQW FAVALASAGV LIQLISFGSI PIVSLALAGT FGFYALLRKK VNVDAKAGLL VETAVLLPVA LIYLVATLDT ATASMLTNDW QLNLMLMAAG IVTTIPLLCF AGAAVRIPLS MLGFFQYIGP SIMFILAVSL FNEPFDAEKC VTFGFIWSAL LVFTLDMAYK RKTA
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