Gene Sbal223_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0402 
SymbolradC 
ID7089540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp448520 
End bp449197 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID643459322 
ProductDNA repair protein RadC 
Protein accessionYP_002356359 
Protein GI217971608 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.30829e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.66485e-10 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCATTA AAGATTGGCC TGAGGGGGAA GGTCCCAGAG ATAAACTGTT ACAAAAAGGG 
GCGGGACAAC TGTCGGATGC GGAGTTATTG GCGGTATTAC TGCGGAACGG TTTGGCGGGA
TTAAACGCGG TTGATCTTGC AAGGTCGCTT ATTAGCGAGT TTGGCGGCCT CAGAAACCTG
CTTTGTGCTC CTCGAAATCA GGTGTGTCGA CTTCCGGGCG TAGGACCTGT AAAATACGCC
CAGCTTCAAG CTGCGGCCGA ATTAGCGCGG CGTGTAGCGC AGGAAAATCT GCAAAGAGGT
CAAGTTTTAA CAAATCCCGA TTTAACTCGG GACTATTTAA TGAGACAATT GGCCGATCGC
TCCTATGAAG TGTTCGCAGT TTTACTGCTG GATAGCCAGC ATAGAGTGAT TCAATTTGTC
GAATTATTCC GCGGTACAAT AGACTCAGCC TCAGTGTACC CACGTGAAGT GGTGAGCTTA
GTGCTGGAGA AAAAGGCCGC AGCAGTTATA GTTTGTCATA ATCATCCGTC TGGTATTGCC
GAGCCCAGTC AGGCTGACCG ACGAATAACT GAGCGATTAA AAAATGCGTT AGCAACCATA
GACGTATCCT TATTGGACCA TATGGTTGTA GGTGATCGAG AGATAGTTTC TTTTGCAGAA
CGAGGCTGGA TTAATTAA
 
Protein sequence
MGIKDWPEGE GPRDKLLQKG AGQLSDAELL AVLLRNGLAG LNAVDLARSL ISEFGGLRNL 
LCAPRNQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLADR
SYEVFAVLLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA
EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN