Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0362 |
Symbol | rpoZ |
ID | 7089500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 405140 |
End bp | 405418 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459283 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_002356320 |
Protein GI | 217971569 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000590702 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTA GAACAAATCG GCAACCGTTT TGATATGATC TTGGTTGCGG CGCGTCGTGC TCGCCAAATC GCCGTGCAGG GTAAAGACCC TATGGTTGAA GAGATGAACG ACAAACCAAC GGTTATCGCC CTGCGTGAAA TCGAACTAGG TTTAGTTAAC GCTCACACCT TAGATGCCGA TGAGCGTCAA ACGGTACGTG AACGTGAAGC AGCTGAAATT GCAGCAGTTT CAGCCATTGC TGAAGGCCGT TCATTATAA
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Protein sequence | MARVTVEDAV EQIGNRFDMI LVAARRARQI AVQGKDPMVE EMNDKPTVIA LREIELGLVN AHTLDADERQ TVREREAAEI AAVSAIAEGR SL
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