| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0356 |
|---|
| Symbol | |
|---|
| ID | 7086643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 397433 |
|---|
| End bp | 398512 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643459277 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002356314 |
|---|
| Protein GI | 217971563 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.143013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000000113905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGCA CGCATCTTCA GCTCGAACGA AAACTCGCTT GGGTGTATTT GATAAACTTA
GTGTTTTATC TTATTCCGCT TGCCATCAAT GCGTATCCAG CATGGAAAAT CGCCCTTAGC
TTTGCCGTGC TCGTTCCTTT TATTGCCAGT TATTTTTGGG CCTATAAGTG CAATCAGAAT
AGCGCCTATC GCCCCATTCT GATGATGGTG GCCATCGCCA CAGCAATCAC CCCAATCAAC
CCGGGATCTA TCTCGTTATT CACCTTTGCC GCTTTTTTCA TTGGCTTTTT TTACCCTCTC
AGAACCTGTC TGTTGGCTAT TGCCGCCTTA ATCGGCCTGT TGTTTGCCCT CAATGAAATT
TACGACTTTA ACAGTTACTA CTTTCCGCTT TACGGCTCAG GATTAGTGCT CGGTGTAGGC
ATGTTTGGCG TAGCCGAACG CAGGCGTCAT CAACATAAAT TGAAAGAACA GCAAAGCACG
CAAGAAATTA GCACCTTAGC GGCTATGGTT GAGCGAGAAC GCATTGCCCG CGATCTACAC
GACATCATGG GCCACAGCTT GTCTTCGATT GCGCTTAAGG CGGAACTGGC AGAAAAACTG
CTGGCAAAAC AGCAATACCA ACTGGCCACA ATCCAGCTTA ATGAACTCGG TCAAATTGCC
CGCGAGAGCC TCAGCCAAAT TCGCCACACC GTATCTGACT ACAAACATAA AGGTCTCGCG
GATAGCGTGA CACAACTGTG TAAACTATTG AGGGAAAAAG GAGTCAGTGT TGAGCTGACA
GGCAATATCC CTAAACTGCC CGCCAGAATG GAGAGCCAGC TGGGATTAAT TGTCACTGAA
CTGGTAAATA ATATTTTACG CCATAGCGGC GCAAGCCAAT GTATTATCGA CTTTATTCAG
CAACCAGATA AGCTAGTCGT TGAGGTCAAA GATAACGGTC CAAGTAAATC TATCGCCGAA
GGCAATGGCC TCACGGGGAT ACGCGAACGT CTCGACAGCT TAGGCGGCAG CTTGAGCTAT
AATCTCGAAC AGGGATATGC ATTTACCGTC AGTTTACCTT TGCAGGGAGC AACAGATTAA
|
|---|
| Protein sequence | MISTHLQLER KLAWVYLINL VFYLIPLAIN AYPAWKIALS FAVLVPFIAS YFWAYKCNQN
SAYRPILMMV AIATAITPIN PGSISLFTFA AFFIGFFYPL RTCLLAIAAL IGLLFALNEI
YDFNSYYFPL YGSGLVLGVG MFGVAERRRH QHKLKEQQST QEISTLAAMV ERERIARDLH
DIMGHSLSSI ALKAELAEKL LAKQQYQLAT IQLNELGQIA RESLSQIRHT VSDYKHKGLA
DSVTQLCKLL REKGVSVELT GNIPKLPARM ESQLGLIVTE LVNNILRHSG ASQCIIDFIQ
QPDKLVVEVK DNGPSKSIAE GNGLTGIRER LDSLGGSLSY NLEQGYAFTV SLPLQGATD
|
|---|
| |