Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0289 |
Symbol | |
ID | 7086576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 330267 |
End bp | 330905 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643459212 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002356249 |
Protein GI | 217971498 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTA AGATCATCCT TGCCGACGAT CATCCTATTA TACTCACTGG CGTGCGTAGT TTGATGGCTG GAATACAGCC AAGTTGTGAA ATTGTCGCTG AAGCAAATAA TGTTTCCGAA TTGTGGCATA CATTGGCGCA ACATGAATGC GACTTATTGA TCACAGACTT TAGCATGCCT AACGATGACA ATGTTGATGG TATGGCCATG ATTAAACAGC TGAGACGAAA GTATCCCAAC TTACCTATAA TAGTGCTAAC TCAAGTGCAT AATTTAGGTG TGCTGCAAGC CCTCATGCAA ATCGGAATTA ATGGTTTATT ATTAAAAAAA TCAGTCATAG CTGAATTGGC CAATACTGTT AAAAAAGTAT TATCGGGTTC AGTGTATATT GGTGATGCTG TTCGTGAATT GTTAAATGAA CAAGGAATTA ATCAATATAG CACCCCAATT GAACTTTCAT TGAAAGAAAT TGAGGTGGTA CGCTTGCTGG CAAATGGCAT GTCGGTTACG CAAGTTGCCA GTTATTTAAA TCGTAGTGTG AAAACCATTA GTACCCAAAA AACCAATGCA ATGCAAAAAC TCGGTTTAAA AAGTGACAGT GAATTGTTTC ATTATGCACA GCAGCAGGGC TTATTTTAA
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Protein sequence | MAFKIILADD HPIILTGVRS LMAGIQPSCE IVAEANNVSE LWHTLAQHEC DLLITDFSMP NDDNVDGMAM IKQLRRKYPN LPIIVLTQVH NLGVLQALMQ IGINGLLLKK SVIAELANTV KKVLSGSVYI GDAVRELLNE QGINQYSTPI ELSLKEIEVV RLLANGMSVT QVASYLNRSV KTISTQKTNA MQKLGLKSDS ELFHYAQQQG LF
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