Gene Sbal223_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0289 
Symbol 
ID7086576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp330267 
End bp330905 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content38% 
IMG OID643459212 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002356249 
Protein GI217971498 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTA AGATCATCCT TGCCGACGAT CATCCTATTA TACTCACTGG CGTGCGTAGT 
TTGATGGCTG GAATACAGCC AAGTTGTGAA ATTGTCGCTG AAGCAAATAA TGTTTCCGAA
TTGTGGCATA CATTGGCGCA ACATGAATGC GACTTATTGA TCACAGACTT TAGCATGCCT
AACGATGACA ATGTTGATGG TATGGCCATG ATTAAACAGC TGAGACGAAA GTATCCCAAC
TTACCTATAA TAGTGCTAAC TCAAGTGCAT AATTTAGGTG TGCTGCAAGC CCTCATGCAA
ATCGGAATTA ATGGTTTATT ATTAAAAAAA TCAGTCATAG CTGAATTGGC CAATACTGTT
AAAAAAGTAT TATCGGGTTC AGTGTATATT GGTGATGCTG TTCGTGAATT GTTAAATGAA
CAAGGAATTA ATCAATATAG CACCCCAATT GAACTTTCAT TGAAAGAAAT TGAGGTGGTA
CGCTTGCTGG CAAATGGCAT GTCGGTTACG CAAGTTGCCA GTTATTTAAA TCGTAGTGTG
AAAACCATTA GTACCCAAAA AACCAATGCA ATGCAAAAAC TCGGTTTAAA AAGTGACAGT
GAATTGTTTC ATTATGCACA GCAGCAGGGC TTATTTTAA
 
Protein sequence
MAFKIILADD HPIILTGVRS LMAGIQPSCE IVAEANNVSE LWHTLAQHEC DLLITDFSMP 
NDDNVDGMAM IKQLRRKYPN LPIIVLTQVH NLGVLQALMQ IGINGLLLKK SVIAELANTV
KKVLSGSVYI GDAVRELLNE QGINQYSTPI ELSLKEIEVV RLLANGMSVT QVASYLNRSV
KTISTQKTNA MQKLGLKSDS ELFHYAQQQG LF