Gene Sbal223_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0256 
Symbol 
ID7085915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp295125 
End bp295811 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content48% 
IMG OID643459179 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002356216 
Protein GI217971465 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.72342e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.06333e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTCGGA TATTATTAAT CGATGACGAT CTGGGTTTAT CGGAGCTACT AGGGCAACTG 
CTCGAGTTAG AAGGGTTTCA ATTAACCTTG GCCTACGACG GTAAACAAGG TTTAGATCTG
GCACTGAGTG CGGATTACGA TCTGATCTTA CTCGATGTCA TGCTGCCTAA ATTGAACGGC
TTCGAAGTCC TGCGTGCACT GCGTCAGCAC AAGCAAACGC CAGTATTAAT GCTGACCGCC
CGCGGCGATG AAATCGATCG CGTAGTTGGG CTTGAAATCG GCGCCGATGA TTATCTGCCA
AAGCCGTTTA ATGACAGAGA ATTAATCGCC CGTATCCGCG CAATTATTCG TCGCTCGAAC
TTAACAACCC AAGAAATCCA TGCCGCGCCC GCCCAAGAAT TTGGCGATTT ACGCTTAGAC
CCATCGCGCC AAGAGGCTTA TTGTAACGAG CAGTTAATCA TACTTACAGG CACAGAATTC
ACTCTGCTGC ACACCCTCGC GCTGCACGCG GGAGAGTTGA TGAATAAGGA AGAGTTAAAC
GAGAAAGTGC TCGGCAAAAA ACTCATGCCC TTCGATCGCA GCTTAGACAT GCATTTATCG
AATCTACGTA AAAAACTCCC CGAGCGTAGC GATGGGCGGC CAAGGGTGAA AACTATCCGT
GGCAAAGGTT ATATTTGGCT TCCATAA
 
Protein sequence
MSRILLIDDD LGLSELLGQL LELEGFQLTL AYDGKQGLDL ALSADYDLIL LDVMLPKLNG 
FEVLRALRQH KQTPVLMLTA RGDEIDRVVG LEIGADDYLP KPFNDRELIA RIRAIIRRSN
LTTQEIHAAP AQEFGDLRLD PSRQEAYCNE QLIILTGTEF TLLHTLALHA GELMNKEELN
EKVLGKKLMP FDRSLDMHLS NLRKKLPERS DGRPRVKTIR GKGYIWLP