Gene Sbal223_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0253 
Symbol 
ID7085912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp290375 
End bp292333 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content51% 
IMG OID643459176 
ProductGAF modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_002356213 
Protein GI217971462 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[K] Transcription 
COG ID[COG3284] Transcriptional activator of acetoin/glycerol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.33378e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAGTTA AACCGCATTT ACCATCGACA CAGGCGTGGT TGGCCGATTC GTGGCAGCGC 
AGCATTGGCG CTGGCTTGTC AGAATTTCAG TTACCCCAAG AGCTTAGGCT CGACGCCAGC
GAACTAAAGC AGAAACATGA GCAATATCAA ATGCTCATTG CATTAGTGCA ATCCCATGCT
TTGCCCTTGT TCAATCAGTT GATGGCGCAT TCTAATAGCC GACTCTTGCT CTCCGATGCC
GAGGGTTATG TGCTTAGGCA CTGGGGCGTG AGCCGCTACT CCACAAAATT GGCGGACGTG
GCTTTGGATA TCGGGGTGAA TTGGCTCGAA CAGCACAAAG GCACCAATGC GATAGGGACG
GCACTCACCG CCAAGCAAGC AGTATCTGTA GTGGGTGAGC AGCATTTTAT TCGTCAGAAT
CGTTTTATGA GTTGCACCGC CTGCCCGATA TTTTCTCCCC AAGGTGAGAT GCTCGGGGTG
ATAGATATCA CCAGTGAGCA GCAAAGACAC ACTCAGCAGA CGCTGATGTT AGTGTCGAGC
TTGGCGCAGC AGGTCGAGAC CGCGCTCTTG TGTCACTTGC CCGATAGCCG TTATCGAATC
GATTTAGCGG CGCAGCCAAA CCTACTGAAT TCGGGTTGGC AGGGCATAGT GATTGCCGAT
AGTGATGGTC GCATTGTGGG GTGCAATCCC ATGGCGAAAC AATTGCTTAG TCATGCCAAG
GTTGGCGATT CCGTCGAGCA GTACTTAGGC GATAATTGGA GCCGTGCGGG TGGCTTTAAT
CAGCATTTAG ACTTGCATCT ACAGACTCAG CCCTTAAATA TTCCCAGCAT CAAGAGTCGG
GTAGCGACTA GTAATAAATC GCTTAATCAA CTGGGCGTGC GGTTTCGCGA CCCTCAACTT
GAGCGCGCAT GGCAACATGC CAATAAGGTG ATCACCAAGC AAATTCCGCT GTTAGTGCTC
GGTGAAACCG GCGTCGGTAA AGAGCAGTTT GTTAAAAAAC TCCACGCCCA GAGCGCGCGT
CGCACCGAGC ATTTAGTGGC GGTGAACTGC GCTGCATTGC CTGCCGAGTT AGTCGAATCT
GAACTCTTTG GTTATCAGGC GGGCGCGTTT ACTGGGGCAA ATCGTACTGG ATTTATCGGC
AAAATTCGCC AAGCCCACGG CGGCTTCTTG TTTTTAGATG AAATTGGCGA AATGCCGCTG
GCGGCCCAGA GTCGTTTACT TAGGGTGTTA CAGGAGCGCG AAGTGGTACC CGTTGGCAGT
AATCAAAGTT TTAAAGTTGA TATTCAAATC ATTGCCGCGA CCCATATGGA TTTGGAGCAA
CAAGTGGCGC AGGGGCTGTT TCGGCAGGAT TTATTCTATC GATTGAATGG TTTGCAAGTA
CGTTTACCCG CGCTGCGTGA GCGGCAGGAT ATCGAGCGTA TTATCCATAA ATTGCATCGT
AAACATCGCA TTGCGCCGCA GGCGATCTGC CCTGAGTTGT TAGGGCTGCT GATGCAACAC
GACTGGCCCG GCAATTTGCG CGAGCTCGAT AATCTTATGC AAGTGGCTTG CTTGATGGCA
GAAGGTGATG ACACCTTAAC TTGGCAGCAT TTACCCGATT ATCTTGCACA AAAATTAGCG
TGCGAGCCGT TAAAAGTGGA TCCGTTAAAT GCACAGCTGT TAAACACACA GCTGTTAAAT
GAGGAGCAGC CATTAGGTGA AGAGGTTAAA ACCGGTCAAA ACTCTGCATC ACATCCGCTG
GCTGGCAAAG TTGTGAGTGG CAAAGTTACA AGTGGCAACA TTGCGGTGCA GCCAACTGCC
AATGCGGTTC AATCGGATTC TCTCCACGAG GCGATTTATA GCAATGTGCT ACAGGCATAC
CAAGCCTGTG GTGGCAATGT GAGCCAATGC GCCAAGCGTT TGGGGATCAG CCGTAATGCC
TTGTATCGTC GATTAAAACA GATGGGACTT AAGGGTTAA
 
Protein sequence
MAVKPHLPST QAWLADSWQR SIGAGLSEFQ LPQELRLDAS ELKQKHEQYQ MLIALVQSHA 
LPLFNQLMAH SNSRLLLSDA EGYVLRHWGV SRYSTKLADV ALDIGVNWLE QHKGTNAIGT
ALTAKQAVSV VGEQHFIRQN RFMSCTACPI FSPQGEMLGV IDITSEQQRH TQQTLMLVSS
LAQQVETALL CHLPDSRYRI DLAAQPNLLN SGWQGIVIAD SDGRIVGCNP MAKQLLSHAK
VGDSVEQYLG DNWSRAGGFN QHLDLHLQTQ PLNIPSIKSR VATSNKSLNQ LGVRFRDPQL
ERAWQHANKV ITKQIPLLVL GETGVGKEQF VKKLHAQSAR RTEHLVAVNC AALPAELVES
ELFGYQAGAF TGANRTGFIG KIRQAHGGFL FLDEIGEMPL AAQSRLLRVL QEREVVPVGS
NQSFKVDIQI IAATHMDLEQ QVAQGLFRQD LFYRLNGLQV RLPALRERQD IERIIHKLHR
KHRIAPQAIC PELLGLLMQH DWPGNLRELD NLMQVACLMA EGDDTLTWQH LPDYLAQKLA
CEPLKVDPLN AQLLNTQLLN EEQPLGEEVK TGQNSASHPL AGKVVSGKVT SGNIAVQPTA
NAVQSDSLHE AIYSNVLQAY QACGGNVSQC AKRLGISRNA LYRRLKQMGL KG