Gene Sbal223_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0174 
Symbol 
ID7086776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp200052 
End bp200678 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content36% 
IMG OID643459094 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002356134 
Protein GI217971383 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA AAATATTGAT AGTCGATGAC CATCCGGTTG TCGTTTTAGC ACTAAAAATC 
ATTTTGGAAC AAAGTGGCTT TGAAGTTATC GCAGAAACTA ACAATGGAGT TGATGCACTA
AAGCTTATTA AAAATCTATC TCCAGATGCG GTCATTCTCG ACATCGGTAT TCCTCAATTA
GATGGACTTG AGGTGATCGA AAGGTCAAGA AAACTACCAA ATAGTCCCTC TATTTTAGTA
TTAACAGCAC AACCCTCTGA ACACTTTGTC TCGCGCTGCA TTCAAGCAGG AGCATCAGGT
TTTGTCTCTA AACTAAAGGA TATGACAGAA GTTACAGGGG CACTTAAAGC AATCCTTACA
GGTCATTCCT ATTTTCCCAT TCAAAGTAAT AGCAACATAA TATCAAAATC AAGTCAGGAT
GAGGCCGAAT TAATAAAAAA GCTCTCTACT CGCGAAATGG TTGTACTACA GCAGTTAGCA
ACAGGTTTAT CCAATAAAGA AATAGCTGAA CGTATGTTAT TAAGTAACAA AACAATTAGC
ACATATAAGA CAAGGCTACT AGATAAATTA AATGCAAGAA CCTTAGTTGA TATAATTGAA
ATTGCAAAAA GGCAAAGCTT AATATGA
 
Protein sequence
MKKKILIVDD HPVVVLALKI ILEQSGFEVI AETNNGVDAL KLIKNLSPDA VILDIGIPQL 
DGLEVIERSR KLPNSPSILV LTAQPSEHFV SRCIQAGASG FVSKLKDMTE VTGALKAILT
GHSYFPIQSN SNIISKSSQD EAELIKKLST REMVVLQQLA TGLSNKEIAE RMLLSNKTIS
TYKTRLLDKL NARTLVDIIE IAKRQSLI