Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0059 |
Symbol | |
ID | 7087324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 69362 |
End bp | 70093 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643458986 |
Product | two component transcriptional regulator, LytTR family |
Protein accession | YP_002356026 |
Protein GI | 217971275 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.182784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAG CCATCATAGT TGAAGATGAA TATCTGGCCC GTGAGGAGCT AGAGTATTTA GTGAAGAGCC ACAGTGAAAT AGACATAGTG GCAAGCTTTG AGGATGGCTT GGAGGCCTTT AAATATCTGC AGGATCATGA GGTTGATGTG GTGTTTTTGG ATATCCAAAT TCCATCCATC GATGGCCTAC TGTTGGCGAA GAATCTGCAT AAATCGACCC ATCCACCCCA TGTGGTGTTT GTGACTGCCT ATAAAGAATT TGCGGTAGAA GCGTTCGAGC TCGAAGCCTT CGATTATATT CTCAAGCCCT ACAATGAGCC GCGGATCATC AGCTTATTGC AGAAGATTGA ACAGGTGGGA CGACAAGCGC CAAAGCCGCA ACATGAAGCC GCGAGTAATG CGAGTCGTAC CGTGAACTTA GTCAAAGGTG AGCGGATTAT CGTTACGCCC TGCGAGCAAA TTTATTACGC CGAGGCTGAT GAAAAACTCA CCTATGTCTA TACCCGCACC GACCGTTATG TGATGCAGAT GACCATTAGT GAGTTTGTCA GCCGCTTGCC CGCCGAGGGC TTTTTCCGGT GCCACCGTTC CTATTGCGTC AATATCAACA AGATCCGCGA AATCGTGCCT TGGTTCAATA GCACTTACCT GATCCGCTTG CATGATTTGT CGTTCGAGGT GCCCGTTAGC CGTAGTAATA TTAAGGCTTT TCGACAGCTG ATGAGGCTGT AA
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Protein sequence | MLKAIIVEDE YLAREELEYL VKSHSEIDIV ASFEDGLEAF KYLQDHEVDV VFLDIQIPSI DGLLLAKNLH KSTHPPHVVF VTAYKEFAVE AFELEAFDYI LKPYNEPRII SLLQKIEQVG RQAPKPQHEA ASNASRTVNL VKGERIIVTP CEQIYYAEAD EKLTYVYTRT DRYVMQMTIS EFVSRLPAEG FFRCHRSYCV NINKIREIVP WFNSTYLIRL HDLSFEVPVS RSNIKAFRQL MRL
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