| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0055 |
|---|
| Symbol | |
|---|
| ID | 7087320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 64208 |
|---|
| End bp | 64897 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643458982 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002356022 |
|---|
| Protein GI | 217971271 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACA AGGTGCTGGT TGTCGATGAT GAAGTGCAAA TTCACACTTT TATGCGGATA
TCGTTAGAAG CGGAAGGCTT TGAATATCAT GGCGCCGCCT CGATTGCCTC TGCCCTCGCC
CAATATCAAG CCCAACGGCC ACACGTGTTA GTGCTCGACC TTGGCTTACC CGACGGCGAT
GGCATCAGCT TGCTGCAAAA CCTTCGGCAG CATGACAAAG TGCCCGTGCT TATCTTAACC
GCCCGCGATC AAGAGGAAGA GAAAATCCGC CTGTTGGAAG CGGGCGCCAA TGATTATCTC
AGCAAGCCAT TTGGGATCAG GGAGTTAATC GCGCGCATTA AGGTATTAGT CCGCGACTTA
GTGGACGAAC CTGCCTTGAG TGATGTGCTG CAGTTTGGCG CACTTAAGCT GCAAAAAAGT
ACCCACCAGC TTTGGCTCGA CCAGCAAGAA ATCGCCTTAA CTAAAAAGGA ATTCGCTCTG
ATTGAGACCT TAATGTCTCA CCCCGGCCAG TTAGTAAAAC AAACTGAATT GCTGCGGGAT
ATTTGGGGCG AAACCCATAC CGATGACAGT CATTATCTAC GGATCTTGGT CAGTCAGTTA
CGCAAAAAGC TCAACGACAG CACAGAGCAA CAGCTGATCA AGACAGAAGC GGGACTCGGT
TATCGCTTGA CTGACATGAG TCAAAAATAA
|
|---|
| Protein sequence | MAYKVLVVDD EVQIHTFMRI SLEAEGFEYH GAASIASALA QYQAQRPHVL VLDLGLPDGD
GISLLQNLRQ HDKVPVLILT ARDQEEEKIR LLEAGANDYL SKPFGIRELI ARIKVLVRDL
VDEPALSDVL QFGALKLQKS THQLWLDQQE IALTKKEFAL IETLMSHPGQ LVKQTELLRD
IWGETHTDDS HYLRILVSQL RKKLNDSTEQ QLIKTEAGLG YRLTDMSQK
|
|---|
| |