Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0019 |
Symbol | fadA |
ID | 7089231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 21712 |
End bp | 22875 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643458943 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_002355986 |
Protein GI | 217971235 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000205749 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAG CTGTTATCGT AGACTGCATC CGTACTCCGA TGGGCCGCTC AAAGGCTGGC GTATTTCGTA ATGTGCGTGC AGAAACTCTG TCTGCCGAAT TAATGAAAGG TCTGTTGCTA CGTAACCCGC AACTCGACCC AAACCTGATT GAAGACGTGA TTTGGGGTTG TGTGCAACAA ACCCTAGAGC AAGGCTTCAA CATCGCCCGT AACGCTTCGC TATTAGCGGG CATTCCAAAG ACTGCTGGCG CTGTGACGGT TAACCGCCTA TGTGGTTCAT CAATGGATGC TATCCATCAA GCTGCGCGTG CGATTATGAC TGGCATGGGC GACACCTTTA TTATTGGTGG CGTAGAACAC ATGGGCCACG TGCCAATGAG CCATGGTGTC GACTTCCACC CAGGTCTTGC TAACAACGTG GCAAAAGCCT CTGGCATGAT GGGTTTAACG GCTGAAATGC TGGGTAAACT GCACGGTATT ACCCGTGAAC AGCAAGATGC TTTTGCGGTA CGTTCACACC AACGCGCTTA TGCTGCGACG GTTGAAGGCC GCTTTGCCAA AGAAATCTAT GGCATTGAAG GTCACGATGC TAACGGTGCC TTAATTAAAG TCCTGCAAGA CGAAGTGATC CGCCCAGAAA CCACAATGGA ATCTTTGGCT GCACTGCGCC CCGTATTTGA TCCAGTAAAT GGTACTGTAA CTGCTGGTAC TTCTTCTGCA CTGTCAGATG GCGCTTCAGC CATGTTGATC ATGGAAGAAT CTAAAGCGCG CGCACTTGGC TTGCCGATTC GTGCACGTAT TCGCTCTATG GCGGTTGCAG GTTGTGACGC GGCTATCATG GGTTACGGCC CAGTGCCTGC CACGCAAAAA GCACTGGCTC GTGCCGGTAT CACAGTTGCC GATTTAGATG TGATTGAACT TAACGAAGCG TTTGCTGCTC AGTCTTTACC TTGTGTGAAA GATTTAGGCT TAGCAGATGT GGTTGATGAC AAAATCAACC TCAACGGCGG CGCGATTGCA CTAGGTCACC CACTGGGTTG TTCAGGCGCT CGTATCTCTA CGACGCTGAT CAACTTAATG GAAGACAAAG ACGCGACCTT AGGGTTAGCG ACCATGTGTA TTGGTTTAGG CCAAGGTATC GCCACTGTAT TCGAACGCGT TTAA
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Protein sequence | MKQAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKGLLL RNPQLDPNLI EDVIWGCVQQ TLEQGFNIAR NASLLAGIPK TAGAVTVNRL CGSSMDAIHQ AARAIMTGMG DTFIIGGVEH MGHVPMSHGV DFHPGLANNV AKASGMMGLT AEMLGKLHGI TREQQDAFAV RSHQRAYAAT VEGRFAKEIY GIEGHDANGA LIKVLQDEVI RPETTMESLA ALRPVFDPVN GTVTAGTSSA LSDGASAMLI MEESKARALG LPIRARIRSM AVAGCDAAIM GYGPVPATQK ALARAGITVA DLDVIELNEA FAAQSLPCVK DLGLADVVDD KINLNGGAIA LGHPLGCSGA RISTTLINLM EDKDATLGLA TMCIGLGQGI ATVFERV
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