Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0018 |
Symbol | |
ID | 7089230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 20306 |
End bp | 21469 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643458942 |
Product | diguanylate cyclase |
Protein accession | YP_002355985 |
Protein GI | 217971234 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000219286 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTACAAA CGGAACAGAC CCTTTTCGAA CAAATGCGGA TTACTGAGCT GGAGATCGAG TCTCGTAAGG CGCTCTTCTC TTTTACTGGG GCGGACGTAA AGGCCCTGCA ATCCTTTAAG CCCATCATTG AAGAAAACAT CGATAAAATC GTCGATGACT TTTATGGCTT ACAAACCAGC GTGTCAGAAA TTGCGCTGCT GATCGGAGAC TCAGACACCC TTGCCCGCTT ACGTACCGCA CAGAGAAGAT ATGTGCTTGA TTTATTTAAT GGTGTTTATG ATCTTGAGTA CGTAAACAAT CGCCTGCGGA TTGGGTTGGT CCATAAACGC ATTGGTGTTG AGCCTAAGCT TTACCTGTCT GCGGTACACA CACTAAAAGA GCTTATCTAC GCCGTGATCA ACTGTTCAGT GCAAGATACA CATCAAGGCG AATGTATCCG TGTCGCGATT GATAAACTGG TGCTGTTTGA TGTCACGCTG GTATTTGATA CTTATATTCG CAGCTTAGTA TCCGAGATTG AGAACGCTAA GGATAAAGCC GAAAAATATG CCCAAAGCAT GGAAAGCAAA GTCAAAGAGC GGACGCAGCA GCTTGAAGAA CTGTCGCAAA CCGATCCCTT AACAGGCCTG CTCAACGTTA GGCATCTACA AGAAACGGCA ACGCGCATAC TCAGGGCTGC CCAAAGGCGT GCCGAACCCG TCAGCGTGAT CTACTTAGAC GTAGATGATT TTAAGTCATT CAACGACACC CAAGGCCATA GATCAGGGGA TGAAGTACTG CGTGCTGTAG CAAAAGCGAT TAAAGAAATC ACCCGTGCCG AGGATCATTG CTTTCGATAT GGTGGAGATG AGTTCTGTAT CATTATGCCT AACTGCCGTG AAGAACAAGC TCGGGATAAT TTCATCACTC GATTCAATCA AAAAATAAAA CTCAGTTTAA ACAATATTTC CTTAAGCTTT GGCATTATTG ATACTGGACC CTATGAGTAC GAAGAAGCCA ATAGCTTAAT TCATAAAGCC GATCAGCGAA TGTATAGCTA CAAACGTGCG TCCAAACAGC AGCAACAAAC TATGGCGGCA GCAAATGATT TAGCACCTGA GAATAGTACC GCTGATGTCC ATTCAATCTC TCAATCTCAA AGCGTTGATA AAGCCGTCGA GTAA
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Protein sequence | MLQTEQTLFE QMRITELEIE SRKALFSFTG ADVKALQSFK PIIEENIDKI VDDFYGLQTS VSEIALLIGD SDTLARLRTA QRRYVLDLFN GVYDLEYVNN RLRIGLVHKR IGVEPKLYLS AVHTLKELIY AVINCSVQDT HQGECIRVAI DKLVLFDVTL VFDTYIRSLV SEIENAKDKA EKYAQSMESK VKERTQQLEE LSQTDPLTGL LNVRHLQETA TRILRAAQRR AEPVSVIYLD VDDFKSFNDT QGHRSGDEVL RAVAKAIKEI TRAEDHCFRY GGDEFCIIMP NCREEQARDN FITRFNQKIK LSLNNISLSF GIIDTGPYEY EEANSLIHKA DQRMYSYKRA SKQQQQTMAA ANDLAPENST ADVHSISQSQ SVDKAVE
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