Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0004 |
Symbol | |
ID | 7089216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3886 |
End bp | 6303 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643458928 |
Product | DNA gyrase, B subunit |
Protein accession | YP_002355971 |
Protein GI | 217971220 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.405147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000301601 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCAGAGA ATAGTTACGA TTCTTCGAGT ATTAAGGTCC TTAAGGGCCT TGATGCAGTA CGTAAGAGAC CTGGGATGTA TATTGGTGAC ACCGACGACG GTACGGGTCT ACATCATATG GTGTTCGAAG TAGTCGATAA CTCTATCGAT GAAGCCTTAG CCGGCCACTG CAGCGATATT ACCATTACTA TCCATGTCGA TGGTTCGGTT TCTGTTAAGG ATGACGGCCG TGGTATTCCG GTCTCTATCC ATGAGGAAGA AGGCGTATCG GCAGCAGAAG TTATCATGAC GGTATTGCAT GCCGGCGGTA AGTTCGACGA TAACTCCTAT AAAGTGTCTG GCGGTCTCCA CGGTGTGGGT GTATCGGTTG TAAACGCTTT ATCTAAAAAG CTGCAAATGA CTATTCGTCG TGCAGGCAAA GTGTACGAGC AGTTTTATAC TCATGGCGTG CCTGATGCAC CAATCAAAGA GATTGGTGAT GCGACTAAAA CCGGTACCGA AATCCGTTTT TGGCCAAGTG AAGATACCTT TAGCGATGTC GAGTTTCACT TTGAAATTCT GGCAAAGCGC GTGCGCGAAC TGTCATTCCT TAACTCAGGC GTAGGTATTC GTCTGGTTGA TGAACGTGAC AACAAGAATG AATTCTTTAA ATACGAAGGC GGTATTAGCG CATTCGTCGA TTATTTGAAC CGTAATAAAA CCCCCGTCAA CAAAGACGTA TTCCACTTTA TGCAAGAGCG TGAAGATGGC ATTACCGTTG AAGTGGCTAT GCAGTGGAAT GACGGTTATC AAGAAAATAT TTTCTGTTTT ACCAACAACA TTCCACAGCG TGATGGTGGT ACTCACTTAG TCGGTTTCCG TAGTGCGTTG ACACGTAACC TCAACAGCTA CATGGAAAAC GAAGGCTATA ACAAGAAAGG CAAAACTAGC GCGACTGGCG ACGATGCCCG TGAAGGTTTG ACTGCCGTTA TCTCTGTTAA AGTGCCTGAT CCTAAGTTCA GCTCGCAAAC CAAAGATAAA CTGGTTTCTA GTGAAGTGAA AACCGCGGTT GAACAAACTA TGGGTGAGAA GCTGAACGAT TATCTGCTGG AAAACCCAGC CGATGCTAAG TTGATTGTTG GTAAGATTGT CGATGCGGCC CGTGCCCGTG AAGCGGCGCG TAAAGCCCGT GAAATGACCC GTCGTAAAGG CGCACTCGAT TTAGGTGGTT TGCCAGGTAA GCTGGCCGAT TGCCAAGAAA AAGATCCTGG TCTTTCAGAA ATTTACATAG TGGAAGGTGA CTCTGCTGGC GGTAGCGCTA AGCAGGGACG TAACCGTAAG AACCAAGCGA TTCTGCCACT GAAAGGTAAA ATTCTAAACG TTGAGAAAGC ACGCTTCGAT AAGATGTTGT CTTCTCAAGA AGTGGCCACA CTGATCACGG CGCTTGGCTG TGGTATTGGT CGCGACGAAT ATAACCCAGA TAAAACTCGT TATCACAACA TCATCATCAT GACGGATGCT GACGTCGACG GCTCGCACAT TCGTACCTTG CTGTTGACCT TCTTCTTCCG TCAAATGCCT GAATTGATAG AACGTGGTTA TGTGTATATT GCTCAGCCAC CACTATTTAA AGTGAAAAAG GGCAAGCAAG AACAGTATTT GAAAGACGAG CCTGCATTGA CTCAATATCT TACGACTCAA GCATTGGATG GCACTATTGT GTACCCAACG CAAGGTGCGA TTGGTATGTC AGGTGAGCCG TTAGAGCGTT TAGTGACTCA GTATCGTGAA GTGGAAGCCA TTGTTGCCCG TTTAGAGCAA CGCTACCCAA CGCACATTAC TAACCGTATG CTTTACCACC CAATGATCAC CAACGAGATG TTGGCCGATG AAGGCAAGAT GAAAGAGTGG ATCGATGCCT TTATCCATGA GCTGGTGGAA ATGGAAAGCA GTGGCGTACT GTATTCTGCT GAGCCGATTC TCGATCCTGA GCGTAAAGTG TATCTGCCTA AGATCACCAT TCGTAAACAC GGTATCGATA CTAACTATCT GTTTACTTAT GACTTCTTCC AATCAAGCGA TTATCAACGT ATCGGTAAGT TAGGTGCGGC GTTAGATGGC ATGATTGAAG AAGGCGGCTA TGTACAACGC GGCGAACGTG TTAAAGAAGT CGGCAGCTTC CTTGAAGCGC TAGATTGGAC GATTTCTGAA GCCAAACGCG GCTTATACAT TCAACGTTAT AAAGGATTGG GTGAGATGAA CCCTGAGCAA TTGTGGGAAA CTACAATGGA TCCTGAATCA CGCCGTATGT TGCAAGTCAC GATTGATGAT GCCGTGGGTG CCGATCAGTT GTTCACTTGT TTGATGGGTG ATCAAGTTGA ACCTCGTCGT GAGTTCATCG AAGCGAACGC ATTGAACGTG GCTAACTTAG ACGTATAG
|
Protein sequence | MSENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNSID EALAGHCSDI TITIHVDGSV SVKDDGRGIP VSIHEEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG VSVVNALSKK LQMTIRRAGK VYEQFYTHGV PDAPIKEIGD ATKTGTEIRF WPSEDTFSDV EFHFEILAKR VRELSFLNSG VGIRLVDERD NKNEFFKYEG GISAFVDYLN RNKTPVNKDV FHFMQEREDG ITVEVAMQWN DGYQENIFCF TNNIPQRDGG THLVGFRSAL TRNLNSYMEN EGYNKKGKTS ATGDDAREGL TAVISVKVPD PKFSSQTKDK LVSSEVKTAV EQTMGEKLND YLLENPADAK LIVGKIVDAA RAREAARKAR EMTRRKGALD LGGLPGKLAD CQEKDPGLSE IYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG RDEYNPDKTR YHNIIIMTDA DVDGSHIRTL LLTFFFRQMP ELIERGYVYI AQPPLFKVKK GKQEQYLKDE PALTQYLTTQ ALDGTIVYPT QGAIGMSGEP LERLVTQYRE VEAIVARLEQ RYPTHITNRM LYHPMITNEM LADEGKMKEW IDAFIHELVE MESSGVLYSA EPILDPERKV YLPKITIRKH GIDTNYLFTY DFFQSSDYQR IGKLGAALDG MIEEGGYVQR GERVKEVGSF LEALDWTISE AKRGLYIQRY KGLGEMNPEQ LWETTMDPES RRMLQVTIDD AVGADQLFTC LMGDQVEPRR EFIEANALNV ANLDV
|
| |