Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_4089 |
Symbol | trmE |
ID | 7873316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 4492442 |
End bp | 4493788 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643701020 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_002891043 |
Protein GI | 237654729 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAAGTC GGCCGGCAAG CCCGCCTGAC ACGATTGCCG CGATCGCGAC GGCACCGGGC CGCGGCGGCA TCGGTGTCGT CCGCGTCTCG GGTGCCGGTC TCGGCGCCTT CGCGCTCGCG CTGTGCGGCC GTACGCCGCA GCCGCGCATC GCGCACTTCA CCCGCTTCCT CGACGAGCAC GAGCGGCCGA TCGACGAGGG GATCCTGCTC TACTTCGCCG CGCCGGCGTC CTTCACGGGC GAGGACGTGC TCGAGCTGCA GGGCCACGGC GGCCCGGTGG TCATGCAGAT GCTGCTCGAG CGCTGCCTGC AACTCGGCGC CCGCCTGGCC GAGCCCGGCG AATTCACCCG TCGCGCCTTT CTCAACGGCA AGCTCGATCT CGCTCAGGCC GAGGGTGTCG CCGACCTGAT CGAGGCCTCC ACTGCGGCGG CTGCGCGCTC GGCGGTGCGC TCGCTGTCCG GGCAGTTCTC CGAGGAAGTC CATCGCATCG TCGACGCGCT CATCGACCTG CGCATGCTGG TCGAGGCGAC GCTCGACTTT CCCGAGGAAG AGATCGACTT CCTCGAGCGC GCGCGCGCGA TGCCGCGCCT CGAATCCATC CGCGAGGCGC TCGAGGGCGT ACTCGACCGT GCGCGCCAGG GGGCGCTGCT GCGCAGCGGG CTCGACGTGG TTCTCGTGGG TGCGCCCAAC GTCGGCAAGT CCAGCCTGCT CAACCAGCTC GCCGGCGAGG AGCGCGCGAT CGTCACCGAC ATCGCCGGAA CGACTCGCGA CGCGCTGCGC GAGACGATCC AGGTCGAGGG TATCCCGCTC CACATCATCG ACACCGCAGG GCTGCGCGAG ACCGAGGACC GGGTCGAGCG CATCGGTATC GAGCGCACCT GGCGCGAGAT CGCGCGCGCC GACGTGATCC TGCATCTGGT CGAGGCGGGC GTGGCGGCCG AGGGCGACCT CGACGAGCGC CTGCCGCAAG GTGTAGAGCG CATCATGGTG GCGAACAAGA TCGACCTCGC AGGATTGCCC GCGGGCCGCG TGGAGGCGGG CGGACGGGTT CGCCTGCAGG TGTCGGCGCG AAGCGGGGAG GGTGTCGAGC TGGTGCGCCA GGAGCTGTTG CGGATCGCCG GCTGGCATGC GCACGGCGAG GATGTGATTC TTGCGCGCGA GCGTCATCTG CTCGCGCTGC GCGAAGCGCT CCGCCATGTG GAGGCTGCAG GCACGCAACT CGGTGCGCTC GAACTCTTTG CCGAGGAGCT GCGCCTCGCG CAGGAGGAAC TCGGCACGAT CACCGGCGAG TTCAGCGCCG ACGACCTGCT CGGGGTGATC TTCGCCCGCT TCTGCATCGG AAAGTAA
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Protein sequence | MESRPASPPD TIAAIATAPG RGGIGVVRVS GAGLGAFALA LCGRTPQPRI AHFTRFLDEH ERPIDEGILL YFAAPASFTG EDVLELQGHG GPVVMQMLLE RCLQLGARLA EPGEFTRRAF LNGKLDLAQA EGVADLIEAS TAAAARSAVR SLSGQFSEEV HRIVDALIDL RMLVEATLDF PEEEIDFLER ARAMPRLESI REALEGVLDR ARQGALLRSG LDVVLVGAPN VGKSSLLNQL AGEERAIVTD IAGTTRDALR ETIQVEGIPL HIIDTAGLRE TEDRVERIGI ERTWREIARA DVILHLVEAG VAAEGDLDER LPQGVERIMV ANKIDLAGLP AGRVEAGGRV RLQVSARSGE GVELVRQELL RIAGWHAHGE DVILARERHL LALREALRHV EAAGTQLGAL ELFAEELRLA QEELGTITGE FSADDLLGVI FARFCIGK
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