Gene Tmz1t_4089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_4089 
SymboltrmE 
ID7873316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4492442 
End bp4493788 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content70% 
IMG OID643701020 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_002891043 
Protein GI237654729 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAGTC GGCCGGCAAG CCCGCCTGAC ACGATTGCCG CGATCGCGAC GGCACCGGGC 
CGCGGCGGCA TCGGTGTCGT CCGCGTCTCG GGTGCCGGTC TCGGCGCCTT CGCGCTCGCG
CTGTGCGGCC GTACGCCGCA GCCGCGCATC GCGCACTTCA CCCGCTTCCT CGACGAGCAC
GAGCGGCCGA TCGACGAGGG GATCCTGCTC TACTTCGCCG CGCCGGCGTC CTTCACGGGC
GAGGACGTGC TCGAGCTGCA GGGCCACGGC GGCCCGGTGG TCATGCAGAT GCTGCTCGAG
CGCTGCCTGC AACTCGGCGC CCGCCTGGCC GAGCCCGGCG AATTCACCCG TCGCGCCTTT
CTCAACGGCA AGCTCGATCT CGCTCAGGCC GAGGGTGTCG CCGACCTGAT CGAGGCCTCC
ACTGCGGCGG CTGCGCGCTC GGCGGTGCGC TCGCTGTCCG GGCAGTTCTC CGAGGAAGTC
CATCGCATCG TCGACGCGCT CATCGACCTG CGCATGCTGG TCGAGGCGAC GCTCGACTTT
CCCGAGGAAG AGATCGACTT CCTCGAGCGC GCGCGCGCGA TGCCGCGCCT CGAATCCATC
CGCGAGGCGC TCGAGGGCGT ACTCGACCGT GCGCGCCAGG GGGCGCTGCT GCGCAGCGGG
CTCGACGTGG TTCTCGTGGG TGCGCCCAAC GTCGGCAAGT CCAGCCTGCT CAACCAGCTC
GCCGGCGAGG AGCGCGCGAT CGTCACCGAC ATCGCCGGAA CGACTCGCGA CGCGCTGCGC
GAGACGATCC AGGTCGAGGG TATCCCGCTC CACATCATCG ACACCGCAGG GCTGCGCGAG
ACCGAGGACC GGGTCGAGCG CATCGGTATC GAGCGCACCT GGCGCGAGAT CGCGCGCGCC
GACGTGATCC TGCATCTGGT CGAGGCGGGC GTGGCGGCCG AGGGCGACCT CGACGAGCGC
CTGCCGCAAG GTGTAGAGCG CATCATGGTG GCGAACAAGA TCGACCTCGC AGGATTGCCC
GCGGGCCGCG TGGAGGCGGG CGGACGGGTT CGCCTGCAGG TGTCGGCGCG AAGCGGGGAG
GGTGTCGAGC TGGTGCGCCA GGAGCTGTTG CGGATCGCCG GCTGGCATGC GCACGGCGAG
GATGTGATTC TTGCGCGCGA GCGTCATCTG CTCGCGCTGC GCGAAGCGCT CCGCCATGTG
GAGGCTGCAG GCACGCAACT CGGTGCGCTC GAACTCTTTG CCGAGGAGCT GCGCCTCGCG
CAGGAGGAAC TCGGCACGAT CACCGGCGAG TTCAGCGCCG ACGACCTGCT CGGGGTGATC
TTCGCCCGCT TCTGCATCGG AAAGTAA
 
Protein sequence
MESRPASPPD TIAAIATAPG RGGIGVVRVS GAGLGAFALA LCGRTPQPRI AHFTRFLDEH 
ERPIDEGILL YFAAPASFTG EDVLELQGHG GPVVMQMLLE RCLQLGARLA EPGEFTRRAF
LNGKLDLAQA EGVADLIEAS TAAAARSAVR SLSGQFSEEV HRIVDALIDL RMLVEATLDF
PEEEIDFLER ARAMPRLESI REALEGVLDR ARQGALLRSG LDVVLVGAPN VGKSSLLNQL
AGEERAIVTD IAGTTRDALR ETIQVEGIPL HIIDTAGLRE TEDRVERIGI ERTWREIARA
DVILHLVEAG VAAEGDLDER LPQGVERIMV ANKIDLAGLP AGRVEAGGRV RLQVSARSGE
GVELVRQELL RIAGWHAHGE DVILARERHL LALREALRHV EAAGTQLGAL ELFAEELRLA
QEELGTITGE FSADDLLGVI FARFCIGK