| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_4062 |
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| Symbol | |
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| ID | 7873289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 4461266 |
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| End bp | 4463107 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643700993 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_002891016 |
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| Protein GI | 237654702 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.244218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGGG GCCTGTTCCG CTTCCTATTG AACGTGCTGC GCATGTTCGT GCGCGCGCTC
GACCTCGTCG TGCGCGGCGT CTTCTACGCC CTGCTGATCT TCGGCCTCGG TGTGCTGGTG
TCCTTCTTCT TCCACCCCGA GCCCGAGGTG CAAGCCGGGT CCGCGCTGGT GCTGCGACCG
GTGGGCACGA TCGTCGAGCA GGCCGAGCTC GAGCCACCGC TGGCGCTGCT GCGCGCCGGG
GGCGCACCGG CCGGCCAGCT GCGTCTGGCG GATCTGGTGG ACGCGGTGCG CAAGGCGCGC
GACGACGCGC GCATCGCCGC GCTGGTGATC GAGACCGACG AGCTGGTCGG CGGCGGCTTC
TCCAAGCTTG CCGAGCTGCG CGCCGCGATC GCCGATTTCA AGGCCTCGGG CAAGCCGGTG
CTGGCGCGCG GCGAGCGCTT CACCCAGTCG CAGTACTACC TCGCCTCGGT GGCCGACGAA
CTCCACCTGT CGCCGGACGG CTTCGTGCTG CTGCGCGGCC TGGCGCGCTA CGGCACCTAC
TTCCGCGACG CGCTCGACAA GCTCGGGGTC AAGGTGCACG TGTTCCGCGT CGGCGAGTAC
AAGTCCTTCT CCGAGCCCTT CACCCGCAGC GACATGTCCG ACGAGGACCG CGAGGCCACC
CGCGACCTCC TCGACGGGCT GTGGCGCTTC ATGCGCGACG ACATCGCCGC CAGCCGCAAG
CTCGCGCCCG CGGCGATCGA CGCGCATGTG AACGACATCC GCGGCGCGCT CGCTGCAGCC
GGGGGCGATG CCGCCAAGGC CGCGCTCGCC GCCGGCCTGG TGGACCGCTT CAGCACCCGC
GATGAATGGC GCGCCCGCCT GATCGAGGCC GTCGGCACCG ACCACGAGGG CAAGGACGTG
CGCACCATCG AGGCCGAGGC CTACCTCGCG CTCGCTGCGG ACGACACCCG TCACGCCGCC
GGCAGCGTGG CGGTGATCGT CGCCCAGGGC ACCATCGTCG ATGGCGCCGA GCCGGCCGGC
GTGGTCGCCG GCGACACCTT CGCCCGCCTG ATCCGCGAGG CGCGCGAGGA CGAGGACATC
AAGGCGCTGG TGCTGCGCAT CGACAGCCCG GGCGGCAGCG CCTGGGCCTC GGAGCTCATC
CGTCGCGAAC TCGAACTCAC CCGCCAGGCC GGCAAGCCGG TGATCGCGTC GATGAGCTCG
GTGGCGGCCT CGGGCGGCTA CTGGATCGCC ACCGGTGCCG ACGAGATCTG GGCGGCGCCT
TCCACGGTGA CCGGCTCGAT CGGCATCTTC GGCCTCTTCC CGGAGTTCTC CGAGCCGCTG
CGCCGCCTCG GCATCGGCGT CGATGGCGTC GCCACCGCGC CGCTCGCCGG CGCGCTCGAC
CCGCGTCGCC CGCTCGACCC GGCCGCGGCC GAGGCCATGC AGCTCGGCAT CGAGCACGGC
TACCGGCGCT TCCTGGAGGT CGTCGCGCAG GCGCGCAAGC TGACGGTCGC GGAGGTCGAC
GCGGTCGCTC GCGGTCGCGT GTGGACCGGA GAGGCGGCGA GCGGCCTCGG CCTGGTCGAC
AAGCTCGGCA GCCTGGACGA CGCGATCGCC GCCGCGGCCG CGCGCGCCGG CCTCGCCGAG
CATCAGGTGG TGTGGCCGGC GGCGGGCGAG TCCCTCGAGC AGCGCGTGTT GCGCCGGCTG
CTGCGCACTG GCGAGGAACT CGGCATCGAC CTGGCCGGCC GCAGCGCGCC GGCCGCGCCG
CTCGCCGCCG CGGCCGCGGA CGTGGAGCGC GCCGCCCGCG CGCTGCTGCG CTGGAACGAT
CCGCGCCACC ACTACCTGCA CTGCCTGTGC GACGCGCCTT GA
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| Protein sequence | MIRGLFRFLL NVLRMFVRAL DLVVRGVFYA LLIFGLGVLV SFFFHPEPEV QAGSALVLRP
VGTIVEQAEL EPPLALLRAG GAPAGQLRLA DLVDAVRKAR DDARIAALVI ETDELVGGGF
SKLAELRAAI ADFKASGKPV LARGERFTQS QYYLASVADE LHLSPDGFVL LRGLARYGTY
FRDALDKLGV KVHVFRVGEY KSFSEPFTRS DMSDEDREAT RDLLDGLWRF MRDDIAASRK
LAPAAIDAHV NDIRGALAAA GGDAAKAALA AGLVDRFSTR DEWRARLIEA VGTDHEGKDV
RTIEAEAYLA LAADDTRHAA GSVAVIVAQG TIVDGAEPAG VVAGDTFARL IREAREDEDI
KALVLRIDSP GGSAWASELI RRELELTRQA GKPVIASMSS VAASGGYWIA TGADEIWAAP
STVTGSIGIF GLFPEFSEPL RRLGIGVDGV ATAPLAGALD PRRPLDPAAA EAMQLGIEHG
YRRFLEVVAQ ARKLTVAEVD AVARGRVWTG EAASGLGLVD KLGSLDDAIA AAAARAGLAE
HQVVWPAAGE SLEQRVLRRL LRTGEELGID LAGRSAPAAP LAAAAADVER AARALLRWND
PRHHYLHCLC DAP
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