Gene Tmz1t_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_4005 
Symbol 
ID7873651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4403097 
End bp4403717 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID643700942 
ProductNapC/NirT cytochrome c domain protein 
Protein accessionYP_002890965 
Protein GI237654651 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA ACAACAAGAG CCTGATGCAG CGCATCCGCG GTGCGGGCTG GGGCGCCATC 
GTCCTGCTCG TCGCCGCGGG CGTGGTGTTC TGGGGGGGCT TCAACTGGGC CCTGGAGATG
ACCAACACGG AGAAGTTCTG CATTTCCTGT CATGAGATGG AGCAGAACGT CTTCAAGGAG
TATCGCAACA CCATCCACTA CCAGAACCGC ACCGGGGTGC GCGCGACCTG CCCGGACTGC
CACGTGCCCA AGGAGTGGGG CCCGAAGATG ATCCGCAAGA TCAAGGCCTC GCGCGAGCTC
TACGGCAAGG TGATGGGCAC CATCGACACG CCGGAGAAGT TCGCCGCCGA GCGCCTGCGC
CTGGCGCAGA ACGAGTGGAA CCGCATGAAG GCGAACAACT CGCAGGAGTG CCGCAACTGC
CACAACTACG AGTATTTCGA CTACTCGGTG CAGGGCCGTC GCTCCAACCA GATGCACCAG
GCCGGCTTCG CCGAGGGCAA GACCTGCATC GACTGCCACA AGGGCATCGC GCACTCGCTG
CCGCCGGTCG ACCAGCACAT CGGCGCGCCG CGCGAAGGCG TCGCTCCCGA GGTGATGCAC
CCGCCCGCGA AGAAGGACTG A
 
Protein sequence
MTDNNKSLMQ RIRGAGWGAI VLLVAAGVVF WGGFNWALEM TNTEKFCISC HEMEQNVFKE 
YRNTIHYQNR TGVRATCPDC HVPKEWGPKM IRKIKASREL YGKVMGTIDT PEKFAAERLR
LAQNEWNRMK ANNSQECRNC HNYEYFDYSV QGRRSNQMHQ AGFAEGKTCI DCHKGIAHSL
PPVDQHIGAP REGVAPEVMH PPAKKD