Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3985 |
Symbol | |
ID | 7873631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 4383286 |
End bp | 4383966 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643700922 |
Product | two component heavy metal response transcriptional regulator, winged helix family |
Protein accession | YP_002890945 |
Protein GI | 237654631 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTC TGATCGTCGA AGACGAAGTG AAGACCGGCG ACTACCTCCG CCAGGGGCTC ACCGAAGCCG GGTTCGTCGT CGACCTTGCA AGAGATGGCC TCGATGGGCT CCACCTCGCA CTCAATGGCG ATTACGACCT CATCGTGCTG GATGTGATGC TTCCGTCGCT GGACGGCTGG GGCATCCTGC AAACACTGCG GCGCGGCGGC CGTGAGACGC CTGTGCTGTT CCTCACTGCC CGCGACCAAA TTGAGGATCG CGTTCGTGGC CTTGAGCTCG GCGCCGATGA TTACCTGGTC AAGCCCTTCG CGTTTTCCGA GTTGCTCGCG CGCGTTCGCA CGCTGCTGCG CAGGGGAAGA AACCACGAAC CGGAGACCCT GCGCTCAGCG AACCTGGAGC TCGATTTGCT TCGCCGCCGG GTGAACCGAT GCGGGCAGCG CATCGATCTG ACCGCCAAGG AGTTTGCCTT GCTGGAACTG CTGCTGCGAC GCAAGGGTGA AGTATTGCCC CGCTCACTCA TCGCTTCGCA GGTGTGGGAC ATGAACTTCG ACAGCGACAC GAACGTGATC GAAGTTGCCG TGCGCAGGTT GCGCGTAAAG GTCGACGACC CCTTTGAGCC GAAGCTGATC CACACCGTGC GGGGTATGGG CTACGTGCTT GAGGCGATGG AGCCGATCTG A
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Protein sequence | MKILIVEDEV KTGDYLRQGL TEAGFVVDLA RDGLDGLHLA LNGDYDLIVL DVMLPSLDGW GILQTLRRGG RETPVLFLTA RDQIEDRVRG LELGADDYLV KPFAFSELLA RVRTLLRRGR NHEPETLRSA NLELDLLRRR VNRCGQRIDL TAKEFALLEL LLRRKGEVLP RSLIASQVWD MNFDSDTNVI EVAVRRLRVK VDDPFEPKLI HTVRGMGYVL EAMEPI
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