Gene Tmz1t_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3918 
SymbolribH 
ID7873564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp4314903 
End bp4315406 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID643700855 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_002890878 
Protein GI237654564 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.263673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCA ACCAATCCGA GAACACCCGC CAGGGCGCCC GTTACGACGG CATCGACGAG 
ATCGAGCCCA ACTTCGCCGG CGCCGGCGTG CGCGTCGGCA TCGTGATGGC GCGCTTCAAC 
CTCGACATCT GCGAGGGCCT GCTGTCGGCC TGCACCGACG AGCTGCTCGC CCTCGGCGTC 
GCGCGCGAGG ACATCCGCAT CGTCACCGTG CCCGGCGCCT TGGAGATCCC GCTCGTGCTG 
CAGACCATGG CCAGGAGCGG CCGCCACGAC GCGCTGGTCG CGCTCGGCGC GGTGGTCCGC 
GGCGAGACCT ACCACTTCGA GCTCGTCTCC AACGAGATGG GCGCGGGCGT CACCCGCGTC 
GGCCTCGACA CCGGGCTGCC GATCGCCAAC GGCGTGCTCA CCACCGAGGA CGACGACCAG 
GCGGTCGCGC GCATGCACGA GAAGGGCGCC GACTGCGCCC GCGCCGCGGT CGAGATGGCC 
AACCTGCTGA AGGTGGTGCG ATGA
 
Protein sequence
MQRNQSENTR QGARYDGIDE IEPNFAGAGV RVGIVMARFN LDICEGLLSA CTDELLALGV 
AREDIRIVTV PGALEIPLVL QTMARSGRHD ALVALGAVVR GETYHFELVS NEMGAGVTRV 
GLDTGLPIAN GVLTTEDDDQ AVARMHEKGA DCARAAVEMA NLLKVVR