Gene Tmz1t_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3917 
Symbol 
ID7873563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp4313794 
End bp4314885 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content70% 
IMG OID643700854 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 
Protein accessionYP_002890877 
Protein GI237654563 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAC TCGCGCCGAT CACCGACATC ATCGCCGACA TCAAGGCCGG GAAAATGGTC 
ATCCTGGTCG ACGAGGAAGA CCGCGAGAAC GAGGGCGACC TCGTCATGGC GGCCGAATTC 
GTCACCCCCG AGGCGATCAA CTTCATGGCC AAGCACGGCC GCGGACTGAT CTGCCTGACG 
CTCACCGACG AGCGCTGCCG CCAGCTCGGC CTGCAGCAGA TGGTGCGCGA CAACCGCACC 
CCGCACGGCA CCGCCTTCAC CGTGTCGATC GAGGCCGCCA CCGGCGTCAC CACCGGCATC 
TCGGCGCACG ACCGCGCGCG CACCGTGCAG GTCGCGGTCG CCCGCCACGC CAGGCCGGAA 
GACATCGTCA CCCCGGGCCA CATCTTCCCG CTCACCGCGC AGAAGGGCGG CGTGCTGATC 
CGCGCCGGTC ACACCGAGGC CGGCTGCGAC CTCGCCCAGC TCGCCGGGCT CGAGCCCGCC 
GCGGTGATCT GCGAGATCCT CAAGGACGAC GGCACCATGG CGCGCCTGCC CGACCTCGTC 
GAGTTCGGCC AGGCGCACGG GCTCAGGATC GGCGCCATCC GCGACCTCAT CGAGTACCGC 
GCCGCCAACG ACAACCTGGT CGACAAGGTC GCCGAGAAGG ATGTGGACAC CGCCCACGGC 
CGCTTCCGCC TCACCGCCTT CGAGGACAAG ACCTCGGGCG ACGTGCATTT CGCCCTGTCG 
CACGGCGACA TCCGCCCCGA GCGCGAGACC CTCGTGCGGG TGCACGAGCC GATCTCGGTG 
CTCGACTTCC TCGACGCCGG CAGCGGCCAC CATACCTTCC CGGTCAATCA GGCGCTCGCG 
ACCCTGGCCG CGGCCGAGGC CGGCGTGATC GTGCTGCTCT ACCGCCCGAT GTCCGGCCGC 
GAGCTGCTCG CCGGCCTCGA CGGCGGCCAC GACCGCCCTA CCGCGAAGTG GGACGCGCGC 
CTGTTCGGCG TCGGCGCGCA GATCCTGCGC GCGCTGCGCG TCGGCAAGAT GCGCCTGCTC 
GCCAGCCCGC GCAAGATCCC GAGCATGACC GGCTTCGGTC TCGAGATCAC CGGCTTCGTC 
GACAAGAACT GA
 
Protein sequence
MSALAPITDI IADIKAGKMV ILVDEEDREN EGDLVMAAEF VTPEAINFMA KHGRGLICLT 
LTDERCRQLG LQQMVRDNRT PHGTAFTVSI EAATGVTTGI SAHDRARTVQ VAVARHARPE 
DIVTPGHIFP LTAQKGGVLI RAGHTEAGCD LAQLAGLEPA AVICEILKDD GTMARLPDLV 
EFGQAHGLRI GAIRDLIEYR AANDNLVDKV AEKDVDTAHG RFRLTAFEDK TSGDVHFALS 
HGDIRPERET LVRVHEPISV LDFLDAGSGH HTFPVNQALA TLAAAEAGVI VLLYRPMSGR 
ELLAGLDGGH DRPTAKWDAR LFGVGAQILR ALRVGKMRLL ASPRKIPSMT GFGLEITGFV 
DKN