| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3896 |
|---|
| Symbol | |
|---|
| ID | 7873544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4291911 |
|---|
| End bp | 4292312 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643700835 |
|---|
| Product | Fimbrial protein pilin |
|---|
| Protein accession | YP_002890858 |
|---|
| Protein GI | 237654544 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TGCAACAAGG CTTCACCCTG ATCGAACTGA TGATCGTCGT GGCGATCATC
GGCATCCTGG CTGCGGTGGC GCTGCCGGCG TATTCGGATT ACCAGGCCAA GGCGAAACTT
ACCGCAGGCC TTGCGGAGAT CTCGGCAGGT AAGACTGCAT TTGAGGAACT CCGTAACAAC
AACGTTGCGG TTACCGCCGC GGCCGATATT GGCCTCCAAG CCACGACCGG GAACTGCGCC
ATTACTGCGA CCGCCACAAC CATCGTTTGC ACTCTGGCGA ATGCGCCTTC GCAGGTCAAT
GGCAAGACGA TCACCTGGAC TCGAACCGCA AGCACTGGCG CGTGGAGTTG CGCAACCAGC
GCCCCGGCCA AGTACGCGCC GAAGACCTGC CCGGGCGTCT AA
|
|---|
| Protein sequence | MKKMQQGFTL IELMIVVAII GILAAVALPA YSDYQAKAKL TAGLAEISAG KTAFEELRNN
NVAVTAAADI GLQATTGNCA ITATATTIVC TLANAPSQVN GKTITWTRTA STGAWSCATS
APAKYAPKTC PGV
|
|---|
| |