| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3852 |
|---|
| Symbol | |
|---|
| ID | 7874094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4251452 |
|---|
| End bp | 4252969 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643700794 |
|---|
| Product | protein of unknown function DUF853 NPT hydrolase putative |
|---|
| Protein accession | YP_002890818 |
|---|
| Protein GI | 237654504 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC CGATGCTGAT CGCGCGCGCG CACGACAAGG ACCAGTTCAA GGACATCTGC
CTGCTGCCGC GCCTGTCCAA CCGCCACGGC CTCATCACCG GCGCCACCGG CACCGGCAAG
ACGGTGACCC TGCAGAAGCT CGCCGAATCC TTCGCCCATA TCGGCGTGCC GGTGTTCGTC
GCCGACATCA AGGGTGACCT CTCCGGCATC GGCGCCGCGG GCGTCAGGTC CGACAAGCTG
ATGCAGCGCC TGGCCGCAAT CGGCATCGAC GACTACACGC CGCGTGCCAA CACGGTGGTG
TTCTGGGACG TGTTCGGCGA GCAGGGCCAT CCGGTGCGCG CCACCATCTC CGACATGGGC
CCGCTCTTGA TCGCGCGCCT GCTCAACCTC AACGACACCC AGACCGGCGT GCTCACGCTG
GTGTTCAAGA TCGCCGACGA CAACGGCATG CTGCTGCTCG ACCTCAAGGA CCTGCGCGCG
ATGGTCCAGT ACGTGGGCGA GAACGCGAAG AGCTTCACCA CCGAGTACGG CAACATCTCC
AGCGCCTCGA TCGGTGCCAT CCAGCGCAAC CTGCTGGCGC TGGAAGAGCA GGGCGGCGAC
GTGTTCTTCG GCGAGCCGAT GCTCGACATC GCCGACCTGA TGCAGACCGA CGCCGATGGC
CGCGGCGTGA TCAACGTGCT CGCCGCGGAC AAGCTCTACC ACTCGCCCAA GCTCTATTCC
ACCTTCCTGC TGTGGATGCT GTCCGAGCTC TTCGAGCAGC TGCCCGAGGT CGGCGACCCC
GACAAGCCGA AGATGGTGTT CTTCTTCGAC GAGGCCCACC TGCTGTTCAA CGACGCGCCC
AAGGCGCTGA TCGAGAAGAT CGAGCAGGTG GTGCGCCTGA TCCGCTCCAA GGGCGTGGGC
GTGTATTTCG TCACCCAGAA CCCGCTCGAC GTGCCCGACA CCGTGCTCGG CCAGCTCGGC
AACCGCGTCC AGCACGCGCT GCGCGCCTTC ACCCCGCGCG ACCAGAAGGC GGTGAAGACC
GCCGCCGACA CCATGCGCCC CAACCCGACC TTCGACGCCG TGGCGGCGAT CACCGAGCTC
GGCGTGGGCG AGGCGCTGAT CTCCTTCCTC GACGAAAAAG GCCGGCCGCA GATCACCGAG
CGCTGCAACG TCATCGCGCC CGATTCGCGC CTCGGTCCGC TCGAGCCCGG CGAGCGCCGG
GCGGCGATCG CCGGCTCGGT GATCTACGGC CACTACGAGA AGGCGGTCGA CCGCGAATCC
GCCTACGAGC TGCTCAAGGC CAGCGCCGCG ACCAAGGCCG CGGTCGAGGC AGGCCGCGCG
GCGGCGAAGG AGGTCGGCGG CGAGGATACC GGCAGTGTGG TCAGCGACAT CCTCTTCGGC
GCCACCGGCC CGCGTGGCGG CAAGCGCGAC GGACTGGTGC AGATCGCCGC CAAGACGGTC
ACGCGCACCA TCGGCAGCAG CCTGGGGCGG CAGATCGTGC GCGGGATATT GGGCTCGCTG
CTGGGCGGCA AGCGCTGA
|
|---|
| Protein sequence | MADPMLIARA HDKDQFKDIC LLPRLSNRHG LITGATGTGK TVTLQKLAES FAHIGVPVFV
ADIKGDLSGI GAAGVRSDKL MQRLAAIGID DYTPRANTVV FWDVFGEQGH PVRATISDMG
PLLIARLLNL NDTQTGVLTL VFKIADDNGM LLLDLKDLRA MVQYVGENAK SFTTEYGNIS
SASIGAIQRN LLALEEQGGD VFFGEPMLDI ADLMQTDADG RGVINVLAAD KLYHSPKLYS
TFLLWMLSEL FEQLPEVGDP DKPKMVFFFD EAHLLFNDAP KALIEKIEQV VRLIRSKGVG
VYFVTQNPLD VPDTVLGQLG NRVQHALRAF TPRDQKAVKT AADTMRPNPT FDAVAAITEL
GVGEALISFL DEKGRPQITE RCNVIAPDSR LGPLEPGERR AAIAGSVIYG HYEKAVDRES
AYELLKASAA TKAAVEAGRA AAKEVGGEDT GSVVSDILFG ATGPRGGKRD GLVQIAAKTV
TRTIGSSLGR QIVRGILGSL LGGKR
|
|---|
| |