Gene Tmz1t_3831 details

Gene Information

• Locus tag: Tmz1t_3831
• Symbol: ruvA
• ID: 7874073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4225384
• End bp: 4225986
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643700773
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_002890797
• Protein GI: 237654483
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGGAC GCATCACCGG CACCCTGCTG GAAAAGAACC CGCCGCAGAT CCTCGTCGAC 
GCCCACGGCG TCGGCTACGA GATCGACGTG CCGATGAGCA CCTTCTACAA CCTGCCCGCC 
ACCGGCGGCA CGGTCAGCCT GCACACGCAC TTCGTCGTGC GCGAGGACGG CCACTTCCTG 
TTCGGCTTCG CCACCGAGGA AGAACGCGCC ACCTTCCGCC AGCTGCTCAA GGTCTCGGGC 
GTGGGCGCGC GCATGGCGCT TGCGGTGCTG TCCGGGCTGT CGGTGAACGA CCTCGCCCAG 
GCGGTGGCGC TGCAGGAGGC CGGGCGGCTG GTGAAGATCC CCGGCATCGG CAAGAAGACC 
GCCGAGCGCC TGCTGCTCGA GCTGCGCGAC AAGCTCGGCA AGGCGCTGCC CAGCATGACG 
GGCGCGCGAC TCGCCGCGGC CGCACCGGGC GCAGCCCCGG ACGCGAAGAG CGACATCCTC 
AACGCCCTGC TCGCGCTCGG CTACAACGAA CGCGAGGCGC TGTCCGCGAT GAAGGGGCTG 
GCCGAGGACG TCGGCGTCTC GGACGGCATC CGCCAGGCGC TGAAGGCGCT GTCGAAGGCA 
TGA 

 

Protein sequence

MIGRITGTLL EKNPPQILVD AHGVGYEIDV PMSTFYNLPA TGGTVSLHTH FVVREDGHFL 
FGFATEEERA TFRQLLKVSG VGARMALAVL SGLSVNDLAQ AVALQEAGRL VKIPGIGKKT 
AERLLLELRD KLGKALPSMT GARLAAAAPG AAPDAKSDIL NALLALGYNE REALSAMKGL 
AEDVGVSDGI RQALKALSKA