| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3785 |
|---|
| Symbol | |
|---|
| ID | 7874028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4170752 |
|---|
| End bp | 4171528 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643700728 |
|---|
| Product | glycosyl transferase, WecB/TagA/CpsF family |
|---|
| Protein accession | YP_002890752 |
|---|
| Protein GI | 237654438 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
|---|
| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA TTTTTCAGGA TTTAGCCGAA AACCCCAACC TTACGACGTT GAGCCTTGAG
GAAACAGCGG ATTTCTTATT GAGCACACCA GCCGAATCGC CACCTGTTGT CCGCGAGGAC
TTGAACGCAT TCAAGATCTG CTTACGGGAG GTCAACGAAG ACGTCCGACG GGCAATCGAG
AACGCAGAGC TTATAAACAT GGACGGGATG TCCATGGTCT TCGCCTACGA GATTCTTTAT
GGAAAGAAAT TTCCACGGGT CACTGGATGC GACCTCTTTA TTTTCCTTTT ATCCAAGCTT
GAGAAAAATA ACAAAACGGC CTACTTCCTC GGAGCAACTC AAGAAACGCT CGACGCCCTC
GTAAAGGTCG TATCACTCAG GTACAACAAA ACCATCATAG CCGGCGCACG CAATGGATAC
TTCAAGAGAT CCGAATGGGA AGACATCATT GATTCCGTGA ACCGCAGCGG AGCGGACTTT
TTGTTTGTCG GAACGCCTTC ACCACAGAAA GAAGAATTTC TTAACTTCGC AAAATCGAAG
CTGATGAATG GGATGGTTCT GATGGGAGTG GGAGGATCTT TCGACGTTGT AGCGGGAAAG
GTTCAACGCG CACCTTTTTG GATGCAGCGA TGGAGCCTGG AGTGGCTGTA TCGAATCCTC
CAGGAGCCAC GGCGGATGTG GAAAAGATAT CTTGTAACCA ACACTAGATT TCTTCTATTC
TTACTCGTGG CAAAATATCT ATTGCTGTGC AGGCGCAGAA AGGCTCCACG TGCTTGA
|
|---|
| Protein sequence | MKNIFQDLAE NPNLTTLSLE ETADFLLSTP AESPPVVRED LNAFKICLRE VNEDVRRAIE
NAELINMDGM SMVFAYEILY GKKFPRVTGC DLFIFLLSKL EKNNKTAYFL GATQETLDAL
VKVVSLRYNK TIIAGARNGY FKRSEWEDII DSVNRSGADF LFVGTPSPQK EEFLNFAKSK
LMNGMVLMGV GGSFDVVAGK VQRAPFWMQR WSLEWLYRIL QEPRRMWKRY LVTNTRFLLF
LLVAKYLLLC RRRKAPRA
|
|---|
| |