| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3721 |
|---|
| Symbol | |
|---|
| ID | 7873720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4088485 |
|---|
| End bp | 4089990 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643700667 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002890691 |
|---|
| Protein GI | 237654377 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCGA AACGGATCGG GGGCGGCGGG GACGACGTGC AGATGGCGCG CGGCGTGCGG
GGCGACGAGG CGAAGGCGCT CGCGCAAGGC GGAGTCGGGC GCGCCGAGCC CGCGCGCCCG
GTGGAGCTCG CCGACTACCA GTGGCCTGCG CACTCGGTGC TGGTGGTCGA CGACGAGGAG
GGCATGCGCA ATTTCCTCGA GCGCACGCTC GCGCGCCGCT GCGGCATGGT GCAGTCGGCC
GCCGATGCCG AGCACGCCGC GGTGCTGATG GCGCGTCTGC ATTTCGACCT GCTGGTCCTC
GACATCGCCC TGCCTGGCAA GTCGGGGATC GAGTGGCTGC ACGAGCTGCG CGAGAATGGT
TATGCCGGCG ACGTGATCCT GATCACCGCC TTCGCCGACA TGGAGACCGC GATCGACGCG
CTGCGCGGCG GCGCCTCGGA CTTCATCCTC AAGCCCTTCC GCGTCGACCA GATCCTCAAC
TCGATCAAGC GCTGCTTCGA GCGTGCCGGC CTGGCGCGCG AGAACTTCGT GCTGCGCCGC
GAGCTCGCCG GCCTGGGCGC CGAGCCCACC GGGCTGATCG GCCACTCGCC CGCGATGGAG
CAGCTGCGCG CGCTGGTGCG CCGCGTCGGG CAGATGCCGA GCACGGTGCT GCTGCTGGGC
GAATCCGGTA CCGGCAAGGA GGTGGTGGCG CGCGCGTTGC ACCAGACCAG CCCGCGCGCG
CAGCGCCCCT TCGTGCCGCT CAACTGCGCG GCGATCGCCT CCGAGCTGAT CGAGAGCGAG
CTCTTCGGCC ACGTCAAGGG CGCCTTCACC GGCGCCACCG AGAACCGCAA CGGTCTGTTC
TACTACGCCC ACGGCGGCAC GCTCTTCCTC GACGAGATCA GCGAGCTGCC GCTGGCGATG
CAGACCCGGC TGCTGCGGGT ACTCGAGGAG CGCAAGCTGC GCCCGGTCGG TTCCGAGCGC
GAGCTGCCGG TGGATGTACG CATCATCGCC GCCTCCAACC GCGACCTCGC CGCCGAGGTG
CGCGCCGGAC GCTTCCGCGA GGACCTCTAC TACCGCCTCG CGGTGGTGGA CATCGGCCTG
CCGCCGCTGC GCGACCGTAC CGAGGACATC CCCGAGCTGA TGCGCCACTT CATGCAGCAG
TTTTCCGTCC AGCTCGGCGT GCCGCCGCTG CCGCTCTCGC ACGAGGTGGT GAACCGGCTC
GCCGGCTACA CCTGGCCTGG CAACGTGCGC GAACTGCGCA ACTACATCGA GCGCTCGCTG
ATTCTCGGCC ACTTCCCGGC GCAGCCGAGC GCCGCACCGA CCGCCGCGCC GACGCCGGCG
GGCGAGCTGG AGTCGAGCCT GGCCGAGGTC GAGCGCCGCC ACATCGAGCG TGTGACCGCC
GCCTGCGAGG GCAACAAGAC CGAGGCCGCG CGCCGGCTGG GCGTGTCGCG CAAGACCCTG
GAGCGCAAGT TCGCCGAGTG GGCGCTCGAG GACGCCGCGG CCGCGCGTGC GGAGCGGCGG
GCCTGA
|
|---|
| Protein sequence | MVAKRIGGGG DDVQMARGVR GDEAKALAQG GVGRAEPARP VELADYQWPA HSVLVVDDEE
GMRNFLERTL ARRCGMVQSA ADAEHAAVLM ARLHFDLLVL DIALPGKSGI EWLHELRENG
YAGDVILITA FADMETAIDA LRGGASDFIL KPFRVDQILN SIKRCFERAG LARENFVLRR
ELAGLGAEPT GLIGHSPAME QLRALVRRVG QMPSTVLLLG ESGTGKEVVA RALHQTSPRA
QRPFVPLNCA AIASELIESE LFGHVKGAFT GATENRNGLF YYAHGGTLFL DEISELPLAM
QTRLLRVLEE RKLRPVGSER ELPVDVRIIA ASNRDLAAEV RAGRFREDLY YRLAVVDIGL
PPLRDRTEDI PELMRHFMQQ FSVQLGVPPL PLSHEVVNRL AGYTWPGNVR ELRNYIERSL
ILGHFPAQPS AAPTAAPTPA GELESSLAEV ERRHIERVTA ACEGNKTEAA RRLGVSRKTL
ERKFAEWALE DAAAARAERR A
|
|---|
| |